Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 CA15P2-201ENST00000611168 834 ntBASIC7.63□□□□□ -1.19
HMCN1Q96RW7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 AC010864.1-201ENST00000609407 1511 ntBASIC7.63□□□□□ -1.19
HMCN1Q96RW7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
HMCN1Q96RW7 RPS2P7-201ENST00000447334 885 ntBASIC7.63□□□□□ -1.19
HMCN1Q96RW7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC7.62□□□□□ -1.19
HMCN1Q96RW7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HMCN1Q96RW7 AC091305.1-201ENST00000479476 895 ntBASIC7.62□□□□□ -1.19
HMCN1Q96RW7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 RASA4CP-201ENST00000424092 1398 ntBASIC7.61□□□□□ -1.19
HMCN1Q96RW7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 KRT18P5-201ENST00000436075 1291 ntBASIC7.61□□□□□ -1.19
HMCN1Q96RW7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
HMCN1Q96RW7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 RAP2CP1-201ENST00000605103 478 ntBASIC7.6□□□□□ -1.19
HMCN1Q96RW7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
HMCN1Q96RW7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 KRT18P24-201ENST00000344739 1156 ntBASIC7.59□□□□□ -1.19
HMCN1Q96RW7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 AP002414.2-202ENST00000590929 1450 ntBASIC7.59□□□□□ -1.19
HMCN1Q96RW7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 MTDHP2-201ENST00000601468 714 ntBASIC7.59□□□□□ -1.19
HMCN1Q96RW7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
HMCN1Q96RW7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 AC008687.6-201ENST00000596318 630 ntBASIC7.58□□□□□ -1.2
HMCN1Q96RW7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC7.58□□□□□ -1.2
HMCN1Q96RW7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HMCN1Q96RW7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
HMCN1Q96RW7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms