Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 HSD17B1P1-201ENST00000590052 955 ntBASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB40AQ8WXH6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 AC138932.3-201ENST00000567634 1902 ntBASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB40AQ8WXH6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40AQ8WXH6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40AQ8WXH6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40AQ8WXH6 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RAB40AQ8WXH6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB40AQ8WXH6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB40AQ8WXH6 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40AQ8WXH6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40AQ8WXH6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.93■□□□□ 0.94
RAB40AQ8WXH6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RAB40AQ8WXH6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
RAB40AQ8WXH6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 AC148477.6-201ENST00000623746 465 ntBASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RAB40AQ8WXH6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.91■□□□□ 0.94
RAB40AQ8WXH6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RAB40AQ8WXH6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB40AQ8WXH6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RAB40AQ8WXH6 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.89■□□□□ 0.94
RAB40AQ8WXH6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RAB40AQ8WXH6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.89■□□□□ 0.93
RAB40AQ8WXH6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RAB40AQ8WXH6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.88■□□□□ 0.93
RAB40AQ8WXH6 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40AQ8WXH6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40AQ8WXH6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RAB40AQ8WXH6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40AQ8WXH6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40AQ8WXH6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40AQ8WXH6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40AQ8WXH6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.87■□□□□ 0.93
RAB40AQ8WXH6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RAB40AQ8WXH6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RAB40AQ8WXH6 GPX1-201ENST00000419349 1106 ntBASIC20.86■□□□□ 0.93
RAB40AQ8WXH6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.86■□□□□ 0.93
RAB40AQ8WXH6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.86■□□□□ 0.93
RAB40AQ8WXH6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RAB40AQ8WXH6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms