Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.32■■□□□ 1.48
PTCD2Q8WV60 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.32■■□□□ 1.48
PTCD2Q8WV60 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 AC009831.1-201ENST00000580420 1582 ntBASIC24.31■■□□□ 1.48
PTCD2Q8WV60 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.31■■□□□ 1.48
PTCD2Q8WV60 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.3■■□□□ 1.48
PTCD2Q8WV60 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PTCD2Q8WV60 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PTCD2Q8WV60 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PTCD2Q8WV60 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
PTCD2Q8WV60 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCD2Q8WV60 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PTCD2Q8WV60 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.29■■□□□ 1.48
PTCD2Q8WV60 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
PTCD2Q8WV60 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.29■■□□□ 1.48
PTCD2Q8WV60 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCD2Q8WV60 AC096887.2-201ENST00000623443 1957 ntBASIC24.29■■□□□ 1.48
PTCD2Q8WV60 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PTCD2Q8WV60 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.28■■□□□ 1.48
PTCD2Q8WV60 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.28■■□□□ 1.48
PTCD2Q8WV60 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.28■■□□□ 1.48
PTCD2Q8WV60 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.28■■□□□ 1.48
PTCD2Q8WV60 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD2Q8WV60 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PTCD2Q8WV60 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 AC026202.3-201ENST00000600805 1127 ntBASIC24.27■■□□□ 1.48
PTCD2Q8WV60 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PTCD2Q8WV60 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.26■■□□□ 1.47
PTCD2Q8WV60 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
PTCD2Q8WV60 MIR3960-201ENST00000583311 91 ntBASIC24.26■■□□□ 1.47
PTCD2Q8WV60 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PTCD2Q8WV60 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
PTCD2Q8WV60 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
PTCD2Q8WV60 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD2Q8WV60 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.25■■□□□ 1.47
PTCD2Q8WV60 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD2Q8WV60 AL592293.1-201ENST00000502889 1188 ntBASIC24.25■■□□□ 1.47
PTCD2Q8WV60 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD2Q8WV60 AC093536.1-201ENST00000569153 554 ntBASIC24.25■■□□□ 1.47
PTCD2Q8WV60 AC133552.2-201ENST00000619106 1032 ntBASIC24.25■■□□□ 1.47
PTCD2Q8WV60 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
PTCD2Q8WV60 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD2Q8WV60 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PTCD2Q8WV60 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD2Q8WV60 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
PTCD2Q8WV60 RP9P-202ENST00000450133 1212 ntBASIC24.24■■□□□ 1.47
PTCD2Q8WV60 AC012354.3-201ENST00000623734 483 ntBASIC24.24■■□□□ 1.47
PTCD2Q8WV60 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD2Q8WV60 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD2Q8WV60 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PTCD2Q8WV60 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.23■■□□□ 1.47
PTCD2Q8WV60 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD2Q8WV60 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD2Q8WV60 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.23■■□□□ 1.47
PTCD2Q8WV60 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD2Q8WV60 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
PTCD2Q8WV60 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD2Q8WV60 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD2Q8WV60 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD2Q8WV60 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
PTCD2Q8WV60 AL033527.3-201ENST00000566366 1196 ntBASIC24.22■■□□□ 1.47
PTCD2Q8WV60 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.21■■□□□ 1.47
PTCD2Q8WV60 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PTCD2Q8WV60 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 RAP2CP1-202ENST00000605179 643 ntBASIC24.2■■□□□ 1.46
PTCD2Q8WV60 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PTCD2Q8WV60 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD2Q8WV60 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD2Q8WV60 AC004987.1-201ENST00000428627 508 ntBASIC24.19■■□□□ 1.46
PTCD2Q8WV60 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.19■■□□□ 1.46
PTCD2Q8WV60 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PTCD2Q8WV60 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
PTCD2Q8WV60 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.18■■□□□ 1.46
PTCD2Q8WV60 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD2Q8WV60 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD2Q8WV60 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PTCD2Q8WV60 AC129492.7-201ENST00000622992 756 ntBASIC24.18■■□□□ 1.46
PTCD2Q8WV60 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
PTCD2Q8WV60 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PTCD2Q8WV60 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms