Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CSNK2A3Q8NEV1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 ECEL1P2-201ENST00000461596 1295 ntBASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 MIR3960-201ENST00000583311 91 ntBASIC20.81■□□□□ 0.92
CSNK2A3Q8NEV1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 SMPD5-203ENST00000639008 1464 ntBASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CSNK2A3Q8NEV1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CSNK2A3Q8NEV1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CSNK2A3Q8NEV1 ERN1-208ENST00000606895 2068 ntBASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CSNK2A3Q8NEV1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CSNK2A3Q8NEV1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK2A3Q8NEV1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.76■□□□□ 0.91
CSNK2A3Q8NEV1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK2A3Q8NEV1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK2A3Q8NEV1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK2A3Q8NEV1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CSNK2A3Q8NEV1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK2A3Q8NEV1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CSNK2A3Q8NEV1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CSNK2A3Q8NEV1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.75■□□□□ 0.91
CSNK2A3Q8NEV1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CSNK2A3Q8NEV1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK2A3Q8NEV1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK2A3Q8NEV1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.74■□□□□ 0.91
CSNK2A3Q8NEV1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.74■□□□□ 0.91
CSNK2A3Q8NEV1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CSNK2A3Q8NEV1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CSNK2A3Q8NEV1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CSNK2A3Q8NEV1 GPX1-201ENST00000419349 1106 ntBASIC20.72■□□□□ 0.91
CSNK2A3Q8NEV1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK2A3Q8NEV1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CSNK2A3Q8NEV1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.71■□□□□ 0.91
CSNK2A3Q8NEV1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CSNK2A3Q8NEV1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK2A3Q8NEV1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.71■□□□□ 0.91
CSNK2A3Q8NEV1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK2A3Q8NEV1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CSNK2A3Q8NEV1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CSNK2A3Q8NEV1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CSNK2A3Q8NEV1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms