Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CPEB3Q8NE35 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.98■□□□□ 0.95
CPEB3Q8NE35 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CPEB3Q8NE35 AC096887.2-201ENST00000623443 1957 ntBASIC20.98■□□□□ 0.95
CPEB3Q8NE35 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.98■□□□□ 0.95
CPEB3Q8NE35 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.98■□□□□ 0.95
CPEB3Q8NE35 U85056.1-201ENST00000616429 682 ntBASIC20.98■□□□□ 0.95
CPEB3Q8NE35 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.98■□□□□ 0.95
CPEB3Q8NE35 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 ABHD17AP5-201ENST00000580133 923 ntBASIC20.97■□□□□ 0.95
CPEB3Q8NE35 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.97■□□□□ 0.95
CPEB3Q8NE35 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPEB3Q8NE35 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPEB3Q8NE35 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.96■□□□□ 0.95
CPEB3Q8NE35 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPEB3Q8NE35 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPEB3Q8NE35 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPEB3Q8NE35 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPEB3Q8NE35 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CPEB3Q8NE35 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPEB3Q8NE35 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPEB3Q8NE35 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPEB3Q8NE35 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPEB3Q8NE35 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPEB3Q8NE35 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.95■□□□□ 0.94
CPEB3Q8NE35 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPEB3Q8NE35 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPEB3Q8NE35 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPEB3Q8NE35 AL592293.1-201ENST00000502889 1188 ntBASIC20.94■□□□□ 0.94
CPEB3Q8NE35 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CPEB3Q8NE35 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPEB3Q8NE35 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CPEB3Q8NE35 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPEB3Q8NE35 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPEB3Q8NE35 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CPEB3Q8NE35 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CPEB3Q8NE35 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPEB3Q8NE35 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPEB3Q8NE35 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CPEB3Q8NE35 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPEB3Q8NE35 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CPEB3Q8NE35 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPEB3Q8NE35 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPEB3Q8NE35 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPEB3Q8NE35 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPEB3Q8NE35 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPEB3Q8NE35 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.91■□□□□ 0.94
CPEB3Q8NE35 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPEB3Q8NE35 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPEB3Q8NE35 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPEB3Q8NE35 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPEB3Q8NE35 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
CPEB3Q8NE35 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPEB3Q8NE35 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.89■□□□□ 0.93
CPEB3Q8NE35 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.89■□□□□ 0.93
CPEB3Q8NE35 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CPEB3Q8NE35 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPEB3Q8NE35 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 KRT18P60-201ENST00000312876 1297 ntBASIC20.88■□□□□ 0.93
CPEB3Q8NE35 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 NTF6A-201ENST00000591175 560 ntBASIC20.88■□□□□ 0.93
CPEB3Q8NE35 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPEB3Q8NE35 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPEB3Q8NE35 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CPEB3Q8NE35 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CPEB3Q8NE35 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.87■□□□□ 0.93
CPEB3Q8NE35 SPCS2P3-201ENST00000500401 656 ntBASIC20.87■□□□□ 0.93
CPEB3Q8NE35 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPEB3Q8NE35 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CPEB3Q8NE35 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms