Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNRC6AQ8NDV7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC6AQ8NDV7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC6AQ8NDV7 AC022616.5-201ENST00000518796 181 ntBASIC22.22■■□□□ 1.15
TNRC6AQ8NDV7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC6AQ8NDV7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNRC6AQ8NDV7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC6AQ8NDV7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC6AQ8NDV7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC6AQ8NDV7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC6AQ8NDV7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TNRC6AQ8NDV7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.21■■□□□ 1.15
TNRC6AQ8NDV7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TNRC6AQ8NDV7 AC131281.2-201ENST00000520478 145 ntBASIC22.2■■□□□ 1.14
TNRC6AQ8NDV7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC6AQ8NDV7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC6AQ8NDV7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC6AQ8NDV7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNRC6AQ8NDV7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC6AQ8NDV7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
TNRC6AQ8NDV7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC6AQ8NDV7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC6AQ8NDV7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TNRC6AQ8NDV7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 MIR935-201ENST00000401179 91 ntBASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TNRC6AQ8NDV7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC6AQ8NDV7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
TNRC6AQ8NDV7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC6AQ8NDV7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TNRC6AQ8NDV7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.17■■□□□ 1.14
TNRC6AQ8NDV7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 LONRF2P2-201ENST00000439212 571 ntBASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.16■■□□□ 1.14
TNRC6AQ8NDV7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TNRC6AQ8NDV7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC6AQ8NDV7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC6AQ8NDV7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
TNRC6AQ8NDV7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TNRC6AQ8NDV7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
TNRC6AQ8NDV7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
TNRC6AQ8NDV7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TNRC6AQ8NDV7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TNRC6AQ8NDV7 LINC01003-201ENST00000564834 1764 ntBASIC22.14■■□□□ 1.13
TNRC6AQ8NDV7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
TNRC6AQ8NDV7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
TNRC6AQ8NDV7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNRC6AQ8NDV7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNRC6AQ8NDV7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TNRC6AQ8NDV7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.13■■□□□ 1.13
TNRC6AQ8NDV7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
TNRC6AQ8NDV7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
TNRC6AQ8NDV7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TNRC6AQ8NDV7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.12■■□□□ 1.13
TNRC6AQ8NDV7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TNRC6AQ8NDV7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
TNRC6AQ8NDV7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC6AQ8NDV7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.11■■□□□ 1.13
TNRC6AQ8NDV7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC6AQ8NDV7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
TNRC6AQ8NDV7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.11■■□□□ 1.13
TNRC6AQ8NDV7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC6AQ8NDV7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
TNRC6AQ8NDV7 MIR4281-201ENST00000580852 62 ntBASIC22.1■■□□□ 1.13
TNRC6AQ8NDV7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
TNRC6AQ8NDV7 KRT18P24-201ENST00000344739 1156 ntBASIC22.1■■□□□ 1.13
TNRC6AQ8NDV7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TNRC6AQ8NDV7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.1■■□□□ 1.13
TNRC6AQ8NDV7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.1■■□□□ 1.13
TNRC6AQ8NDV7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
TNRC6AQ8NDV7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.09■■□□□ 1.13
TNRC6AQ8NDV7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.09■■□□□ 1.13
TNRC6AQ8NDV7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.08■■□□□ 1.13
TNRC6AQ8NDV7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TNRC6AQ8NDV7 MIR638-201ENST00000385237 100 ntBASIC22.08■■□□□ 1.12
TNRC6AQ8NDV7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.08■■□□□ 1.12
TNRC6AQ8NDV7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
TNRC6AQ8NDV7 AC137630.3-201ENST00000607245 391 ntBASIC22.08■■□□□ 1.12
TNRC6AQ8NDV7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.07■■□□□ 1.12
TNRC6AQ8NDV7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms