Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC168Q8NDH2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC168Q8NDH2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC168Q8NDH2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC168Q8NDH2 AC120024.1-201ENST00000562672 995 ntBASIC20.49■□□□□ 0.87
CCDC168Q8NDH2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 AC010997.5-201ENST00000609182 354 ntBASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 MIR6724-1-201ENST00000616420 92 ntBASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 MIR6724-2-201ENST00000616483 92 ntBASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 MIR6724-4-201ENST00000617390 92 ntBASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 MIR6724-3-201ENST00000622482 92 ntBASIC20.48■□□□□ 0.87
CCDC168Q8NDH2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC168Q8NDH2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC168Q8NDH2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC168Q8NDH2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC168Q8NDH2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC168Q8NDH2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC168Q8NDH2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC168Q8NDH2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC168Q8NDH2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC168Q8NDH2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC168Q8NDH2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC168Q8NDH2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC168Q8NDH2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC168Q8NDH2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC168Q8NDH2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CCDC168Q8NDH2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC168Q8NDH2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC168Q8NDH2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.44■□□□□ 0.86
CCDC168Q8NDH2 WHAMMP3-201ENST00000611636 1609 ntBASIC20.43■□□□□ 0.86
CCDC168Q8NDH2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC168Q8NDH2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CCDC168Q8NDH2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.43■□□□□ 0.86
CCDC168Q8NDH2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 PBX2P1-201ENST00000493219 1291 ntBASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 ABCB10P3-201ENST00000561950 2166 ntBASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 MIR6821-201ENST00000617625 74 ntBASIC20.42■□□□□ 0.86
CCDC168Q8NDH2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 MTDHP2-201ENST00000601468 714 ntBASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC168Q8NDH2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CCDC168Q8NDH2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC168Q8NDH2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC168Q8NDH2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC168Q8NDH2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.4■□□□□ 0.86
CCDC168Q8NDH2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.39■□□□□ 0.86
CCDC168Q8NDH2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.39■□□□□ 0.86
CCDC168Q8NDH2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC168Q8NDH2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC168Q8NDH2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC168Q8NDH2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC168Q8NDH2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC168Q8NDH2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC168Q8NDH2 AC097381.1-201ENST00000429019 1296 ntBASIC20.38■□□□□ 0.85
CCDC168Q8NDH2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC168Q8NDH2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCDC168Q8NDH2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC168Q8NDH2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 AC090192.1-201ENST00000517740 490 ntBASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 ST7-AS1-201ENST00000456775 1889 ntBASIC20.37■□□□□ 0.85
CCDC168Q8NDH2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC168Q8NDH2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC168Q8NDH2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCDC168Q8NDH2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CCDC168Q8NDH2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC168Q8NDH2 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC168Q8NDH2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC168Q8NDH2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms