Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
ARHGEF39Q8N4T4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
ARHGEF39Q8N4T4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.83■■□□□ 1.25
ARHGEF39Q8N4T4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
ARHGEF39Q8N4T4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.83■■□□□ 1.24
ARHGEF39Q8N4T4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.82■■□□□ 1.24
ARHGEF39Q8N4T4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 AC087393.1-201ENST00000582896 145 ntBASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 ERN1-208ENST00000606895 2068 ntBASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
ARHGEF39Q8N4T4 RPS2P7-201ENST00000447334 885 ntBASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ARHGEF39Q8N4T4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 AC092803.2-201ENST00000564287 1899 ntBASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ARHGEF39Q8N4T4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ARHGEF39Q8N4T4 AC096887.2-201ENST00000623443 1957 ntBASIC22.78■■□□□ 1.24
ARHGEF39Q8N4T4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.77■■□□□ 1.24
ARHGEF39Q8N4T4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 AC010501.1-201ENST00000606270 1962 ntBASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 KRT18P10-201ENST00000388836 1287 ntBASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
ARHGEF39Q8N4T4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 PVT1_1.1-201ENST00000615125 194 ntBASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
ARHGEF39Q8N4T4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
ARHGEF39Q8N4T4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 AC091060.1-201ENST00000623524 1766 ntBASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 AC074183.2-201ENST00000623112 922 ntBASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
ARHGEF39Q8N4T4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 LONRF2P2-201ENST00000439212 571 ntBASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
ARHGEF39Q8N4T4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms