Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SCML4Q8N228 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
SCML4Q8N228 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCML4Q8N228 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.2■■□□□ 1.62
SCML4Q8N228 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.2■■□□□ 1.62
SCML4Q8N228 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCML4Q8N228 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SCML4Q8N228 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCML4Q8N228 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.19■■□□□ 1.62
SCML4Q8N228 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.19■■□□□ 1.62
SCML4Q8N228 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SCML4Q8N228 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCML4Q8N228 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SCML4Q8N228 AC010501.1-201ENST00000606270 1962 ntBASIC25.18■■□□□ 1.62
SCML4Q8N228 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SCML4Q8N228 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SCML4Q8N228 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCML4Q8N228 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCML4Q8N228 AL033527.3-201ENST00000566366 1196 ntBASIC25.18■■□□□ 1.62
SCML4Q8N228 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCML4Q8N228 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SCML4Q8N228 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCML4Q8N228 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SCML4Q8N228 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SCML4Q8N228 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SCML4Q8N228 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.17■■□□□ 1.62
SCML4Q8N228 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SCML4Q8N228 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.17■■□□□ 1.62
SCML4Q8N228 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.17■■□□□ 1.62
SCML4Q8N228 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.17■■□□□ 1.62
SCML4Q8N228 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.17■■□□□ 1.62
SCML4Q8N228 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCML4Q8N228 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.16■■□□□ 1.62
SCML4Q8N228 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.16■■□□□ 1.62
SCML4Q8N228 RPS2P7-201ENST00000447334 885 ntBASIC25.16■■□□□ 1.62
SCML4Q8N228 DUX4L18-201ENST00000553347 1267 ntBASIC25.16■■□□□ 1.62
SCML4Q8N228 AC087393.1-201ENST00000582896 145 ntBASIC25.16■■□□□ 1.62
SCML4Q8N228 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SCML4Q8N228 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.16■■□□□ 1.62
SCML4Q8N228 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.15■■□□□ 1.62
SCML4Q8N228 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.15■■□□□ 1.62
SCML4Q8N228 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SCML4Q8N228 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SCML4Q8N228 ERN1-208ENST00000606895 2068 ntBASIC25.14■■□□□ 1.62
SCML4Q8N228 DUSP8P4-201ENST00000399538 1761 ntBASIC25.14■■□□□ 1.62
SCML4Q8N228 AC091060.1-201ENST00000623524 1766 ntBASIC25.14■■□□□ 1.62
SCML4Q8N228 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SCML4Q8N228 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCML4Q8N228 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.13■■□□□ 1.61
SCML4Q8N228 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCML4Q8N228 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SCML4Q8N228 AC074183.2-201ENST00000623112 922 ntBASIC25.13■■□□□ 1.61
SCML4Q8N228 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.13■■□□□ 1.61
SCML4Q8N228 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.13■■□□□ 1.61
SCML4Q8N228 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SCML4Q8N228 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.12■■□□□ 1.61
SCML4Q8N228 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC25.12■■□□□ 1.61
SCML4Q8N228 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCML4Q8N228 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SCML4Q8N228 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SCML4Q8N228 AC096887.2-201ENST00000623443 1957 ntBASIC25.11■■□□□ 1.61
SCML4Q8N228 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCML4Q8N228 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
SCML4Q8N228 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCML4Q8N228 HYI-210ENST00000486909 905 ntTSL 5 BASIC25.11■■□□□ 1.61
SCML4Q8N228 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SCML4Q8N228 AC145676.1-201ENST00000514988 2004 ntBASIC25.1■■□□□ 1.61
SCML4Q8N228 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCML4Q8N228 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC25.1■■□□□ 1.61
SCML4Q8N228 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SCML4Q8N228 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCML4Q8N228 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
SCML4Q8N228 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCML4Q8N228 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC25.09■■□□□ 1.61
SCML4Q8N228 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SCML4Q8N228 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.09■■□□□ 1.61
SCML4Q8N228 AC019171.1-201ENST00000601251 1056 ntBASIC25.09■■□□□ 1.61
SCML4Q8N228 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC25.09■■□□□ 1.61
SCML4Q8N228 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC25.09■■□□□ 1.61
SCML4Q8N228 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCML4Q8N228 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SCML4Q8N228 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SCML4Q8N228 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SCML4Q8N228 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.08■■□□□ 1.6
SCML4Q8N228 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.6
SCML4Q8N228 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCML4Q8N228 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCML4Q8N228 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.07■■□□□ 1.6
SCML4Q8N228 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.07■■□□□ 1.6
SCML4Q8N228 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCML4Q8N228 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SCML4Q8N228 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.07■■□□□ 1.6
SCML4Q8N228 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SCML4Q8N228 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SCML4Q8N228 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.06■■□□□ 1.6
SCML4Q8N228 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCML4Q8N228 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.05■■□□□ 1.6
SCML4Q8N228 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SCML4Q8N228 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25.05■■□□□ 1.6
SCML4Q8N228 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms