Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DHX40Q8IX18 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DHX40Q8IX18 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DHX40Q8IX18 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DHX40Q8IX18 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DHX40Q8IX18 LINC01971-201ENST00000617888 1048 ntBASIC26.73■■□□□ 1.87
DHX40Q8IX18 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
DHX40Q8IX18 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DHX40Q8IX18 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
DHX40Q8IX18 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
DHX40Q8IX18 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DHX40Q8IX18 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DHX40Q8IX18 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DHX40Q8IX18 HLA-V-202ENST00000446817 847 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L13-201ENST00000554103 1267 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L15-201ENST00000611059 1267 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L23-201ENST00000615195 1269 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L24-201ENST00000617576 1269 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L22-201ENST00000618238 1269 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L20-201ENST00000619712 1269 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L21-201ENST00000622058 1269 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L10-201ENST00000622460 1267 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 DUX4L25-201ENST00000624915 1269 ntBASIC26.72■■□□□ 1.87
DHX40Q8IX18 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.72■■□□□ 1.87
DHX40Q8IX18 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.71■■□□□ 1.87
DHX40Q8IX18 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
DHX40Q8IX18 AC008813.1-201ENST00000536597 885 ntBASIC26.71■■□□□ 1.87
DHX40Q8IX18 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
DHX40Q8IX18 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
DHX40Q8IX18 AL359258.2-201ENST00000564063 1566 ntBASIC26.71■■□□□ 1.87
DHX40Q8IX18 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
DHX40Q8IX18 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
DHX40Q8IX18 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
DHX40Q8IX18 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
DHX40Q8IX18 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.87
DHX40Q8IX18 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
DHX40Q8IX18 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.7■■□□□ 1.86
DHX40Q8IX18 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.7■■□□□ 1.86
DHX40Q8IX18 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DHX40Q8IX18 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DHX40Q8IX18 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DHX40Q8IX18 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DHX40Q8IX18 LINC01124-201ENST00000409786 2117 ntBASIC26.69■■□□□ 1.86
DHX40Q8IX18 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DHX40Q8IX18 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
DHX40Q8IX18 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DHX40Q8IX18 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DHX40Q8IX18 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DHX40Q8IX18 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DHX40Q8IX18 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DHX40Q8IX18 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DHX40Q8IX18 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
DHX40Q8IX18 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.68■■□□□ 1.86
DHX40Q8IX18 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DHX40Q8IX18 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DHX40Q8IX18 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DHX40Q8IX18 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DHX40Q8IX18 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
DHX40Q8IX18 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
DHX40Q8IX18 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
DHX40Q8IX18 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.67■■□□□ 1.86
DHX40Q8IX18 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DHX40Q8IX18 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.67■■□□□ 1.86
DHX40Q8IX18 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
DHX40Q8IX18 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
DHX40Q8IX18 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.66■■□□□ 1.86
DHX40Q8IX18 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.66■■□□□ 1.86
DHX40Q8IX18 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.66■■□□□ 1.86
DHX40Q8IX18 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DHX40Q8IX18 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
DHX40Q8IX18 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
DHX40Q8IX18 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
DHX40Q8IX18 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DHX40Q8IX18 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DHX40Q8IX18 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DHX40Q8IX18 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
DHX40Q8IX18 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.65■■□□□ 1.86
DHX40Q8IX18 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.65■■□□□ 1.86
DHX40Q8IX18 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DHX40Q8IX18 SLC6A10P-202ENST00000431994 2058 ntBASIC26.65■■□□□ 1.86
DHX40Q8IX18 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DHX40Q8IX18 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DHX40Q8IX18 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.65■■□□□ 1.86
DHX40Q8IX18 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.64■■□□□ 1.86
DHX40Q8IX18 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
DHX40Q8IX18 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.85
DHX40Q8IX18 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
DHX40Q8IX18 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.64■■□□□ 1.85
DHX40Q8IX18 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DHX40Q8IX18 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DHX40Q8IX18 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.63■■□□□ 1.85
DHX40Q8IX18 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
DHX40Q8IX18 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.63■■□□□ 1.85
DHX40Q8IX18 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DHX40Q8IX18 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
DHX40Q8IX18 AP003733.4-201ENST00000623785 1697 ntBASIC26.63■■□□□ 1.85
DHX40Q8IX18 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.62■■□□□ 1.85
DHX40Q8IX18 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
DHX40Q8IX18 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms