Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 THA1P-201ENST00000590384 1145 ntBASIC24.64■■□□□ 1.54
SFTPA1Q8IWL2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.63■■□□□ 1.53
SFTPA1Q8IWL2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 AP004609.3-201ENST00000610705 1884 ntBASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 AC131212.1-201ENST00000613771 668 ntBASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFTPA1Q8IWL2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SFTPA1Q8IWL2 AC239859.2-201ENST00000444165 318 ntBASIC24.61■■□□□ 1.53
SFTPA1Q8IWL2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.61■■□□□ 1.53
SFTPA1Q8IWL2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.6■■□□□ 1.53
SFTPA1Q8IWL2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.6■■□□□ 1.53
SFTPA1Q8IWL2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.6■■□□□ 1.53
SFTPA1Q8IWL2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SFTPA1Q8IWL2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SFTPA1Q8IWL2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SFTPA1Q8IWL2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SFTPA1Q8IWL2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFTPA1Q8IWL2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.58■■□□□ 1.53
SFTPA1Q8IWL2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFTPA1Q8IWL2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFTPA1Q8IWL2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SFTPA1Q8IWL2 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SFTPA1Q8IWL2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SFTPA1Q8IWL2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SFTPA1Q8IWL2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.57■■□□□ 1.52
SFTPA1Q8IWL2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.57■■□□□ 1.52
SFTPA1Q8IWL2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SFTPA1Q8IWL2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SFTPA1Q8IWL2 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SFTPA1Q8IWL2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.55■■□□□ 1.52
SFTPA1Q8IWL2 AL356441.2-201ENST00000443009 864 ntBASIC24.55■■□□□ 1.52
SFTPA1Q8IWL2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.55■■□□□ 1.52
SFTPA1Q8IWL2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.55■■□□□ 1.52
SFTPA1Q8IWL2 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SFTPA1Q8IWL2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SFTPA1Q8IWL2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
SFTPA1Q8IWL2 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.54■■□□□ 1.52
SFTPA1Q8IWL2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.54■■□□□ 1.52
SFTPA1Q8IWL2 AC142086.6-201ENST00000621154 1765 ntBASIC24.54■■□□□ 1.52
SFTPA1Q8IWL2 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SFTPA1Q8IWL2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
SFTPA1Q8IWL2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.53■■□□□ 1.52
SFTPA1Q8IWL2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
SFTPA1Q8IWL2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
SFTPA1Q8IWL2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
SFTPA1Q8IWL2 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
SFTPA1Q8IWL2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
SFTPA1Q8IWL2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SFTPA1Q8IWL2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SFTPA1Q8IWL2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SFTPA1Q8IWL2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.52■■□□□ 1.52
SFTPA1Q8IWL2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SFTPA1Q8IWL2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
SFTPA1Q8IWL2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.51■■□□□ 1.51
SFTPA1Q8IWL2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.51■■□□□ 1.51
SFTPA1Q8IWL2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.5■■□□□ 1.51
SFTPA1Q8IWL2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SFTPA1Q8IWL2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SFTPA1Q8IWL2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
SFTPA1Q8IWL2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.49■■□□□ 1.51
SFTPA1Q8IWL2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SFTPA1Q8IWL2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
SFTPA1Q8IWL2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.48■■□□□ 1.51
SFTPA1Q8IWL2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
SFTPA1Q8IWL2 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.48■■□□□ 1.51
SFTPA1Q8IWL2 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SFTPA1Q8IWL2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SFTPA1Q8IWL2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.47■■□□□ 1.51
SFTPA1Q8IWL2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.47■■□□□ 1.51
SFTPA1Q8IWL2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
SFTPA1Q8IWL2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SFTPA1Q8IWL2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.46■■□□□ 1.51
SFTPA1Q8IWL2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SFTPA1Q8IWL2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SFTPA1Q8IWL2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.46■■□□□ 1.51
SFTPA1Q8IWL2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.46■■□□□ 1.51
SFTPA1Q8IWL2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SFTPA1Q8IWL2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.45■■□□□ 1.5
SFTPA1Q8IWL2 Z92544.1-202ENST00000571933 1220 ntBASIC24.45■■□□□ 1.5
SFTPA1Q8IWL2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SFTPA1Q8IWL2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SFTPA1Q8IWL2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.45■■□□□ 1.5
SFTPA1Q8IWL2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.44■■□□□ 1.5
SFTPA1Q8IWL2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.44■■□□□ 1.5
SFTPA1Q8IWL2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SFTPA1Q8IWL2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SFTPA1Q8IWL2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms