Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF546Q86UE3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF546Q86UE3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF546Q86UE3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF546Q86UE3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF546Q86UE3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF546Q86UE3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF546Q86UE3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF546Q86UE3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF546Q86UE3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF546Q86UE3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 AC096887.2-201ENST00000623443 1957 ntBASIC19.85■□□□□ 0.77
ZNF546Q86UE3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 AC135983.2-203ENST00000454486 1613 ntBASIC19.85■□□□□ 0.77
ZNF546Q86UE3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ZNF546Q86UE3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF546Q86UE3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF546Q86UE3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF546Q86UE3 AL391121.1-201ENST00000607967 1349 ntBASIC19.84■□□□□ 0.77
ZNF546Q86UE3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF546Q86UE3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF546Q86UE3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF546Q86UE3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF546Q86UE3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF546Q86UE3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF546Q86UE3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
ZNF546Q86UE3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF546Q86UE3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF546Q86UE3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ZNF546Q86UE3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZNF546Q86UE3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF546Q86UE3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF546Q86UE3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF546Q86UE3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
ZNF546Q86UE3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.81■□□□□ 0.76
ZNF546Q86UE3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF546Q86UE3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF546Q86UE3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.8■□□□□ 0.76
ZNF546Q86UE3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF546Q86UE3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 AP003733.4-201ENST00000623785 1697 ntBASIC19.79■□□□□ 0.76
ZNF546Q86UE3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF546Q86UE3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ZNF546Q86UE3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF546Q86UE3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF546Q86UE3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF546Q86UE3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF546Q86UE3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF546Q86UE3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF546Q86UE3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF546Q86UE3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
ZNF546Q86UE3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.77■□□□□ 0.76
ZNF546Q86UE3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF546Q86UE3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF546Q86UE3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF546Q86UE3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF546Q86UE3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF546Q86UE3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF546Q86UE3 WHAMMP2-203ENST00000563942 1603 ntBASIC19.76■□□□□ 0.75
ZNF546Q86UE3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF546Q86UE3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF546Q86UE3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF546Q86UE3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF546Q86UE3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF546Q86UE3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF546Q86UE3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZNF546Q86UE3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF546Q86UE3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF546Q86UE3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms