Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COLCA1Q6ZS62 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
COLCA1Q6ZS62 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
COLCA1Q6ZS62 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COLCA1Q6ZS62 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.78■□□□□ 0.92
COLCA1Q6ZS62 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
COLCA1Q6ZS62 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
COLCA1Q6ZS62 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COLCA1Q6ZS62 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
COLCA1Q6ZS62 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
COLCA1Q6ZS62 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
COLCA1Q6ZS62 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COLCA1Q6ZS62 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 RARRES2P2-201ENST00000394842 485 ntBASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 AC020928.2-201ENST00000588717 2197 ntBASIC20.76■□□□□ 0.91
COLCA1Q6ZS62 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.75■□□□□ 0.91
COLCA1Q6ZS62 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COLCA1Q6ZS62 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COLCA1Q6ZS62 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.75■□□□□ 0.91
COLCA1Q6ZS62 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COLCA1Q6ZS62 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COLCA1Q6ZS62 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COLCA1Q6ZS62 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COLCA1Q6ZS62 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COLCA1Q6ZS62 AC009831.1-201ENST00000580420 1582 ntBASIC20.74■□□□□ 0.91
COLCA1Q6ZS62 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.73■□□□□ 0.91
COLCA1Q6ZS62 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.73■□□□□ 0.91
COLCA1Q6ZS62 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COLCA1Q6ZS62 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COLCA1Q6ZS62 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.73■□□□□ 0.91
COLCA1Q6ZS62 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COLCA1Q6ZS62 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 AC097639.1-201ENST00000565519 1891 ntBASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 AC133552.2-201ENST00000619106 1032 ntBASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COLCA1Q6ZS62 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
COLCA1Q6ZS62 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.7■□□□□ 0.9
COLCA1Q6ZS62 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COLCA1Q6ZS62 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.7■□□□□ 0.9
COLCA1Q6ZS62 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COLCA1Q6ZS62 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.7■□□□□ 0.9
COLCA1Q6ZS62 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COLCA1Q6ZS62 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.7■□□□□ 0.9
COLCA1Q6ZS62 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.69■□□□□ 0.9
COLCA1Q6ZS62 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COLCA1Q6ZS62 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COLCA1Q6ZS62 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COLCA1Q6ZS62 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COLCA1Q6ZS62 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COLCA1Q6ZS62 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.67■□□□□ 0.9
COLCA1Q6ZS62 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COLCA1Q6ZS62 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.67■□□□□ 0.9
COLCA1Q6ZS62 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COLCA1Q6ZS62 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COLCA1Q6ZS62 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COLCA1Q6ZS62 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA1Q6ZS62 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA1Q6ZS62 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
COLCA1Q6ZS62 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA1Q6ZS62 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA1Q6ZS62 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA1Q6ZS62 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COLCA1Q6ZS62 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms