Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA2Q6UWI4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.8■□□□□ 0.6
SHISA2Q6UWI4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SHISA2Q6UWI4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA2Q6UWI4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SHISA2Q6UWI4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.79■□□□□ 0.6
SHISA2Q6UWI4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SHISA2Q6UWI4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.79■□□□□ 0.6
SHISA2Q6UWI4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SHISA2Q6UWI4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 ABCB10P3-201ENST00000561950 2166 ntBASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 AC120024.1-201ENST00000562672 995 ntBASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 AC133561.4-201ENST00000566112 224 ntBASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 AC110285.6-201ENST00000617652 491 ntBASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SHISA2Q6UWI4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SHISA2Q6UWI4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.77■□□□□ 0.6
SHISA2Q6UWI4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SHISA2Q6UWI4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.77■□□□□ 0.6
SHISA2Q6UWI4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.77■□□□□ 0.6
SHISA2Q6UWI4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHISA2Q6UWI4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 AL356740.2-201ENST00000601559 647 ntBASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 AC010997.5-201ENST00000609182 354 ntBASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 AL117332.1-201ENST00000622628 974 ntBASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHISA2Q6UWI4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 AC096631.2-201ENST00000436136 790 ntBASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 MIR3621-201ENST00000580529 85 ntBASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.75■□□□□ 0.59
SHISA2Q6UWI4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 MIR6724-1-201ENST00000616420 92 ntBASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 MIR6724-2-201ENST00000616483 92 ntBASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 MIR6724-4-201ENST00000617390 92 ntBASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 MIR6724-3-201ENST00000622482 92 ntBASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SHISA2Q6UWI4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA2Q6UWI4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA2Q6UWI4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.73■□□□□ 0.59
SHISA2Q6UWI4 AC092666.2-201ENST00000613287 246 ntBASIC18.73■□□□□ 0.59
SHISA2Q6UWI4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.73■□□□□ 0.59
SHISA2Q6UWI4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SHISA2Q6UWI4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA2Q6UWI4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA2Q6UWI4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.72■□□□□ 0.59
SHISA2Q6UWI4 MTDHP2-201ENST00000601468 714 ntBASIC18.72■□□□□ 0.59
SHISA2Q6UWI4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SHISA2Q6UWI4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA2Q6UWI4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SHISA2Q6UWI4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.71■□□□□ 0.59
SHISA2Q6UWI4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SHISA2Q6UWI4 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SHISA2Q6UWI4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHISA2Q6UWI4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHISA2Q6UWI4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.7■□□□□ 0.58
SHISA2Q6UWI4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.7■□□□□ 0.58
SHISA2Q6UWI4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHISA2Q6UWI4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SHISA2Q6UWI4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.69■□□□□ 0.58
SHISA2Q6UWI4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SHISA2Q6UWI4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA2Q6UWI4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SHISA2Q6UWI4 AL139393.2-201ENST00000608721 2025 ntBASIC18.69■□□□□ 0.58
SHISA2Q6UWI4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.68■□□□□ 0.58
SHISA2Q6UWI4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA2Q6UWI4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA2Q6UWI4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SHISA2Q6UWI4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms