Protein–RNA interactions for Protein: Q68CR1

SEL1L3, Protein sel-1 homolog 3, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3Q68CR1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.44■■□□□ 1.5
SEL1L3Q68CR1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.44■■□□□ 1.5
SEL1L3Q68CR1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SEL1L3Q68CR1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SEL1L3Q68CR1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SEL1L3Q68CR1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SEL1L3Q68CR1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.43■■□□□ 1.5
SEL1L3Q68CR1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SEL1L3Q68CR1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SEL1L3Q68CR1 AC145676.1-201ENST00000514988 2004 ntBASIC24.43■■□□□ 1.5
SEL1L3Q68CR1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SEL1L3Q68CR1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.42■■□□□ 1.5
SEL1L3Q68CR1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SEL1L3Q68CR1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SEL1L3Q68CR1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SEL1L3Q68CR1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SEL1L3Q68CR1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SEL1L3Q68CR1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SEL1L3Q68CR1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SEL1L3Q68CR1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.4■■□□□ 1.5
SEL1L3Q68CR1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.4■■□□□ 1.5
SEL1L3Q68CR1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SEL1L3Q68CR1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.4■■□□□ 1.5
SEL1L3Q68CR1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SEL1L3Q68CR1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
SEL1L3Q68CR1 RARRES2P1-201ENST00000474487 481 ntBASIC24.38■■□□□ 1.49
SEL1L3Q68CR1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.38■■□□□ 1.49
SEL1L3Q68CR1 MIR6765-201ENST00000614092 87 ntBASIC24.38■■□□□ 1.49
SEL1L3Q68CR1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.38■■□□□ 1.49
SEL1L3Q68CR1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SEL1L3Q68CR1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SEL1L3Q68CR1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SEL1L3Q68CR1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SEL1L3Q68CR1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SEL1L3Q68CR1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.37■■□□□ 1.49
SEL1L3Q68CR1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.37■■□□□ 1.49
SEL1L3Q68CR1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SEL1L3Q68CR1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.36■■□□□ 1.49
SEL1L3Q68CR1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
SEL1L3Q68CR1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SEL1L3Q68CR1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SEL1L3Q68CR1 AC018755.3-202ENST00000596210 929 ntBASIC24.36■■□□□ 1.49
SEL1L3Q68CR1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SEL1L3Q68CR1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.36■■□□□ 1.49
SEL1L3Q68CR1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SEL1L3Q68CR1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SEL1L3Q68CR1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.35■■□□□ 1.49
SEL1L3Q68CR1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SEL1L3Q68CR1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SEL1L3Q68CR1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
SEL1L3Q68CR1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SEL1L3Q68CR1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 BHLHE23-202ENST00000612929 1109 ntBASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SEL1L3Q68CR1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SEL1L3Q68CR1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.33■■□□□ 1.49
SEL1L3Q68CR1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.33■■□□□ 1.49
SEL1L3Q68CR1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.32■■□□□ 1.48
SEL1L3Q68CR1 AC010980.1-201ENST00000587192 1142 ntBASIC24.32■■□□□ 1.48
SEL1L3Q68CR1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SEL1L3Q68CR1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
SEL1L3Q68CR1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SEL1L3Q68CR1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SEL1L3Q68CR1 AC020928.2-201ENST00000588717 2197 ntBASIC24.31■■□□□ 1.48
SEL1L3Q68CR1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.31■■□□□ 1.48
SEL1L3Q68CR1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SEL1L3Q68CR1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
SEL1L3Q68CR1 AC139795.1-202ENST00000500444 432 ntBASIC24.29■■□□□ 1.48
SEL1L3Q68CR1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SEL1L3Q68CR1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
SEL1L3Q68CR1 AC142472.1-201ENST00000612013 1741 ntBASIC24.27■■□□□ 1.48
SEL1L3Q68CR1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.27■■□□□ 1.48
SEL1L3Q68CR1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SEL1L3Q68CR1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24.27■■□□□ 1.48
SEL1L3Q68CR1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SEL1L3Q68CR1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SEL1L3Q68CR1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.26■■□□□ 1.47
SEL1L3Q68CR1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SEL1L3Q68CR1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SEL1L3Q68CR1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SEL1L3Q68CR1 AC092803.2-201ENST00000564287 1899 ntBASIC24.26■■□□□ 1.47
SEL1L3Q68CR1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
SEL1L3Q68CR1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SEL1L3Q68CR1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.25■■□□□ 1.47
SEL1L3Q68CR1 DUSP8P4-201ENST00000399538 1761 ntBASIC24.25■■□□□ 1.47
SEL1L3Q68CR1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.25■■□□□ 1.47
SEL1L3Q68CR1 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms