Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 MSS1YMR023C 1581 nt7.18□□□□□ -1.26 RIP-Chip
UBP3Q01477 YPR1YDR368W 939 nt7.18□□□□□ -1.26 RIP-Chip
UBP3Q01477 MMS2YGL087C 414 nt7.18□□□□□ -1.26
UBP3Q01477 ADD66YKL206C 804 nt7.18□□□□□ -1.26
UBP3Q01477 MRPL19YNL185C 477 nt7.18□□□□□ -1.26
UBP3Q01477 VAM3YOR106W 852 nt7.18□□□□□ -1.26
UBP3Q01477 POS5YPL188W 1245 nt7.18□□□□□ -1.26
UBP3Q01477 SLX1YBR228W 915 nt7.18□□□□□ -1.26
UBP3Q01477 LPL1YOR059C 1353 nt7.18□□□□□ -1.26 RIP-Chip
UBP3Q01477 SEC23YPR181C 2307 nt7.17□□□□□ -1.26
UBP3Q01477 HMLALPHA1YCL066W 528 nt7.17□□□□□ -1.26
UBP3Q01477 MATALPHA1YCR040W 528 nt7.17□□□□□ -1.26
UBP3Q01477 YDL158CYDL158C 309 nt7.17□□□□□ -1.26
UBP3Q01477 YDL177CYDL177C 513 nt7.17□□□□□ -1.26
UBP3Q01477 HED1YDR014W-A 489 nt7.17□□□□□ -1.26
UBP3Q01477 UPS3YDR185C 540 nt7.17□□□□□ -1.26
UBP3Q01477 LIA1YJR070C 978 nt7.17□□□□□ -1.26 RIP-Chip
UBP3Q01477 RDN5-2RDN5-2 119 nt7.17□□□□□ -1.26
UBP3Q01477 RDN5-3RDN5-3 119 nt7.17□□□□□ -1.26
UBP3Q01477 RDN5-4RDN5-4 119 nt7.17□□□□□ -1.26
UBP3Q01477 RDN5-5RDN5-5 119 nt7.17□□□□□ -1.26
UBP3Q01477 TSR3YOR006C 942 nt7.17□□□□□ -1.26
UBP3Q01477 LSC1YOR142W 990 nt7.17□□□□□ -1.26
UBP3Q01477 YBR113WYBR113W 483 nt7.17□□□□□ -1.26
UBP3Q01477 PPT1YGR123C 1542 nt7.17□□□□□ -1.26
UBP3Q01477 EFM1YHL039W 1758 nt7.16□□□□□ -1.26
UBP3Q01477 CYB2YML054C 1776 nt7.16□□□□□ -1.26 RIP-Chip
UBP3Q01477 TAH11YJR046W 1815 nt7.16□□□□□ -1.26 RIP-Chip
UBP3Q01477 YSC83YHR017W 1158 nt7.16□□□□□ -1.26 RIP-Chip
UBP3Q01477 NTG1YAL015C 1200 nt7.16□□□□□ -1.26 RIP-Chip
UBP3Q01477 DSC2YOL073C 969 nt7.16□□□□□ -1.26
UBP3Q01477 CHL4YDR254W 1377 nt7.16□□□□□ -1.26 RIP-Chip
UBP3Q01477 VMA2YBR127C 1554 nt7.16□□□□□ -1.26 RIP-Chip
UBP3Q01477 TPK1YJL164C 1194 nt7.15□□□□□ -1.26
UBP3Q01477 YOR111WYOR111W 699 nt7.15□□□□□ -1.26
UBP3Q01477 RDL2YOR286W 450 nt7.15□□□□□ -1.26
UBP3Q01477 ISA2YPR067W 558 nt7.15□□□□□ -1.26
UBP3Q01477 YHR020WYHR020W 2067 nt7.15□□□□□ -1.27
UBP3Q01477 MRPL35YDR322W 1104 nt7.14□□□□□ -1.27
UBP3Q01477 SCP1YOR367W 603 nt7.14□□□□□ -1.27
UBP3Q01477 FRE5YOR384W 2085 nt7.14□□□□□ -1.27
UBP3Q01477 TAZ1YPR140W 1146 nt7.14□□□□□ -1.27
UBP3Q01477 SKY1YMR216C 2229 nt7.13□□□□□ -1.27 RIP-Chip
UBP3Q01477 HXT15YDL245C 1704 nt7.13□□□□□ -1.27
UBP3Q01477 HXT16YJR158W 1704 nt7.13□□□□□ -1.27
UBP3Q01477 KIN1YDR122W 3195 nt7.13□□□□□ -1.27 RIP-Chip
UBP3Q01477 RKM4YDR257C 1485 nt7.13□□□□□ -1.27 RIP-Chip
UBP3Q01477 GPD1YDL022W 1176 nt7.13□□□□□ -1.27 RIP-Chip
UBP3Q01477 AAD6YFL056C 639 nt7.13□□□□□ -1.27
UBP3Q01477 LCL3YGL085W 825 nt7.13□□□□□ -1.27
UBP3Q01477 YKL102CYKL102C 306 nt7.13□□□□□ -1.27
UBP3Q01477 YKR073CYKR073C 321 nt7.13□□□□□ -1.27
UBP3Q01477 SWD1YAR003W 1281 nt7.13□□□□□ -1.27
UBP3Q01477 GFD1YMR255W 567 nt7.13□□□□□ -1.27
UBP3Q01477 YNL092WYNL092W 1203 nt7.13□□□□□ -1.27
UBP3Q01477 YNR014WYNR014W 639 nt7.13□□□□□ -1.27 RIP-Chip
UBP3Q01477 MRPL23YOR150W 492 nt7.13□□□□□ -1.27
UBP3Q01477 RQC1YDR333C 2172 nt7.12□□□□□ -1.27
UBP3Q01477 STT3YGL022W 2157 nt7.12□□□□□ -1.27
UBP3Q01477 COQ1YBR003W 1422 nt7.12□□□□□ -1.27
UBP3Q01477 YMR034CYMR034C 1305 nt7.12□□□□□ -1.27
UBP3Q01477 FET3YMR058W 1911 nt7.12□□□□□ -1.27
UBP3Q01477 MED2YDL005C 1296 nt7.12□□□□□ -1.27
UBP3Q01477 YFL013W-AYFL013W-A 804 nt7.12□□□□□ -1.27
UBP3Q01477 YHR022CYHR022C 771 nt7.12□□□□□ -1.27
UBP3Q01477 MTF1YMR228W 1026 nt7.12□□□□□ -1.27
UBP3Q01477 RRP40YOL142W 723 nt7.12□□□□□ -1.27
UBP3Q01477 TMA46YOR091W 1038 nt7.12□□□□□ -1.27
UBP3Q01477 CLN1YMR199W 1641 nt7.12□□□□□ -1.27
UBP3Q01477 SAL1YNL083W 1485 nt7.11□□□□□ -1.27
UBP3Q01477 SRV2YNL138W 1581 nt7.11□□□□□ -1.27
UBP3Q01477 QCR6YFR033C 444 nt7.1□□□□□ -1.27 RIP-Chip
UBP3Q01477 YGL072CYGL072C 360 nt7.1□□□□□ -1.27
UBP3Q01477 MHO1YJR008W 1017 nt7.1□□□□□ -1.27
UBP3Q01477 SRY1YKL218C 981 nt7.1□□□□□ -1.27
UBP3Q01477 DID2YKR035W-A 615 nt7.1□□□□□ -1.27
UBP3Q01477 PML1YLR016C 615 nt7.1□□□□□ -1.27
UBP3Q01477 YLR169WYLR169W 354 nt7.1□□□□□ -1.27
UBP3Q01477 NOG2YNR053C 1461 nt7.1□□□□□ -1.27
UBP3Q01477 YMR155WYMR155W 1644 nt7.09□□□□□ -1.27
UBP3Q01477 CLB5YPR120C 1308 nt7.09□□□□□ -1.27 RIP-Chip
UBP3Q01477 PPM2YOL141W 2088 nt7.09□□□□□ -1.27
UBP3Q01477 ASF1YJL115W 840 nt7.09□□□□□ -1.27
UBP3Q01477 YKR075CYKR075C 924 nt7.09□□□□□ -1.27
UBP3Q01477 SRL2YLR082C 1179 nt7.09□□□□□ -1.27 RIP-Chip
UBP3Q01477 YOL107WYOL107W 1029 nt7.09□□□□□ -1.27
UBP3Q01477 MKC7YDR144C 1791 nt7.09□□□□□ -1.27
UBP3Q01477 SAS4YDR181C 1446 nt7.09□□□□□ -1.28 RIP-Chip
UBP3Q01477 CRF1YDR223W 1404 nt7.09□□□□□ -1.28
UBP3Q01477 SPO77YLR341W 1434 nt7.09□□□□□ -1.28
UBP3Q01477 YLL066CYLL066C 3618 nt7.08□□□□□ -1.28
UBP3Q01477 PPH22YDL188C 1134 nt7.08□□□□□ -1.28
UBP3Q01477 FMO1YHR176W 1299 nt7.08□□□□□ -1.28
UBP3Q01477 DOM34YNL001W 1161 nt7.08□□□□□ -1.28
UBP3Q01477 GIT1YCR098C 1557 nt7.08□□□□□ -1.28
UBP3Q01477 DDC1YPL194W 1839 nt7.07□□□□□ -1.28 RIP-Chip
UBP3Q01477 ATP6Q0085 780 nt7.07□□□□□ -1.28
UBP3Q01477 HEM2YGL040C 1029 nt7.07□□□□□ -1.28
UBP3Q01477 YNL319WYNL319W 441 nt7.07□□□□□ -1.28
UBP3Q01477 PEX31YGR004W 1389 nt7.07□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms