Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CLCN4P51793 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
CLCN4P51793 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CLCN4P51793 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.57■■□□□ 1.68
CLCN4P51793 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CLCN4P51793 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CLCN4P51793 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CLCN4P51793 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.56■■□□□ 1.68
CLCN4P51793 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CLCN4P51793 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.56■■□□□ 1.68
CLCN4P51793 LINC01003-201ENST00000564834 1764 ntBASIC25.56■■□□□ 1.68
CLCN4P51793 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.55■■□□□ 1.68
CLCN4P51793 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLCN4P51793 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CLCN4P51793 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
CLCN4P51793 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.55■■□□□ 1.68
CLCN4P51793 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.55■■□□□ 1.68
CLCN4P51793 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLCN4P51793 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CLCN4P51793 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CLCN4P51793 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.54■■□□□ 1.68
CLCN4P51793 KRT125P-201ENST00000546827 989 ntBASIC25.54■■□□□ 1.68
CLCN4P51793 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.54■■□□□ 1.68
CLCN4P51793 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CLCN4P51793 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLCN4P51793 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLCN4P51793 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLCN4P51793 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.53■■□□□ 1.68
CLCN4P51793 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.53■■□□□ 1.68
CLCN4P51793 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLCN4P51793 MIR4787-201ENST00000607364 84 ntBASIC25.53■■□□□ 1.68
CLCN4P51793 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLCN4P51793 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CLCN4P51793 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CLCN4P51793 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLCN4P51793 KRT18P24-201ENST00000344739 1156 ntBASIC25.52■■□□□ 1.68
CLCN4P51793 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
CLCN4P51793 BX664725.1-201ENST00000438252 379 ntBASIC25.52■■□□□ 1.68
CLCN4P51793 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.52■■□□□ 1.68
CLCN4P51793 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.52■■□□□ 1.68
CLCN4P51793 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLCN4P51793 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.52■■□□□ 1.68
CLCN4P51793 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CLCN4P51793 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CLCN4P51793 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLCN4P51793 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
CLCN4P51793 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLCN4P51793 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLCN4P51793 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CLCN4P51793 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CLCN4P51793 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CLCN4P51793 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
CLCN4P51793 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CLCN4P51793 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.49■■□□□ 1.67
CLCN4P51793 BX255925.1-201ENST00000566954 1854 ntBASIC25.49■■□□□ 1.67
CLCN4P51793 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLCN4P51793 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLCN4P51793 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLCN4P51793 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLCN4P51793 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.48■■□□□ 1.67
CLCN4P51793 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLCN4P51793 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CLCN4P51793 AC142086.6-201ENST00000621154 1765 ntBASIC25.48■■□□□ 1.67
CLCN4P51793 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLCN4P51793 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLCN4P51793 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CLCN4P51793 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.47■■□□□ 1.67
CLCN4P51793 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CLCN4P51793 AC008406.3-201ENST00000620001 1374 ntBASIC25.46■■□□□ 1.67
CLCN4P51793 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLCN4P51793 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLCN4P51793 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.46■■□□□ 1.67
CLCN4P51793 UNC93B8-201ENST00000511903 705 ntBASIC25.46■■□□□ 1.67
CLCN4P51793 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.46■■□□□ 1.67
CLCN4P51793 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC25.46■■□□□ 1.67
CLCN4P51793 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLCN4P51793 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
CLCN4P51793 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
CLCN4P51793 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
CLCN4P51793 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CLCN4P51793 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLCN4P51793 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.45■■□□□ 1.66
CLCN4P51793 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CLCN4P51793 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CLCN4P51793 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.44■■□□□ 1.66
CLCN4P51793 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.44■■□□□ 1.66
CLCN4P51793 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CLCN4P51793 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CLCN4P51793 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CLCN4P51793 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.43■■□□□ 1.66
CLCN4P51793 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.43■■□□□ 1.66
CLCN4P51793 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.43■■□□□ 1.66
CLCN4P51793 AC137630.3-201ENST00000607245 391 ntBASIC25.43■■□□□ 1.66
CLCN4P51793 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CLCN4P51793 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.43■■□□□ 1.66
CLCN4P51793 AC142472.1-201ENST00000612013 1741 ntBASIC25.43■■□□□ 1.66
CLCN4P51793 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.42■■□□□ 1.66
CLCN4P51793 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
CLCN4P51793 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CLCN4P51793 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms