Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 DOC1YGL240W 753 nt5.18□□□□□ -1.58
CDC40P40968 PSR2YLR019W 1194 nt5.18□□□□□ -1.58
CDC40P40968 YML122CYML122C 381 nt5.18□□□□□ -1.58
CDC40P40968 ENV9YOR246C 993 nt5.18□□□□□ -1.58
CDC40P40968 PMA1YGL008C 2757 nt5.18□□□□□ -1.58
CDC40P40968 MSY1YPL097W 1479 nt5.18□□□□□ -1.58
CDC40P40968 ABZ1YNR033W 2364 nt5.18□□□□□ -1.58
CDC40P40968 RHO3YIL118W 696 nt5.17□□□□□ -1.58
CDC40P40968 YKL018C-AYKL018C-A 300 nt5.17□□□□□ -1.58
CDC40P40968 TSR3YOR006C 942 nt5.17□□□□□ -1.58
CDC40P40968 YMR034CYMR034C 1305 nt5.17□□□□□ -1.58
CDC40P40968 CTS2YDR371W 1536 nt5.17□□□□□ -1.58
CDC40P40968 PGM1YKL127W 1713 nt5.17□□□□□ -1.58
CDC40P40968 YHL017WYHL017W 1599 nt5.16□□□□□ -1.58
CDC40P40968 FMP40YPL222W 2067 nt5.16□□□□□ -1.58
CDC40P40968 PIH1YHR034C 1035 nt5.16□□□□□ -1.58
CDC40P40968 CTR2YHR175W 570 nt5.16□□□□□ -1.58
CDC40P40968 KRE9YJL174W 831 nt5.16□□□□□ -1.58
CDC40P40968 REC107YJR021C 945 nt5.16□□□□□ -1.58
CDC40P40968 MIA40YKL195W 1212 nt5.16□□□□□ -1.58
CDC40P40968 GEP5YLR091W 882 nt5.16□□□□□ -1.58
CDC40P40968 PPR1YLR014C 2715 nt5.16□□□□□ -1.58
CDC40P40968 YLH47YPR125W 1365 nt5.16□□□□□ -1.58
CDC40P40968 SCT1YBL011W 2280 nt5.15□□□□□ -1.58
CDC40P40968 YPQ2YDR352W 954 nt5.15□□□□□ -1.59
CDC40P40968 YKL107WYKL107W 930 nt5.15□□□□□ -1.59
CDC40P40968 PRE5YMR314W 705 nt5.15□□□□□ -1.59
CDC40P40968 RTC4YNL254C 1206 nt5.15□□□□□ -1.59
CDC40P40968 BSC4YNL269W 396 nt5.15□□□□□ -1.59
CDC40P40968 ODC2YOR222W 924 nt5.15□□□□□ -1.59
CDC40P40968 YHR020WYHR020W 2067 nt5.15□□□□□ -1.59
CDC40P40968 MCM6YGL201C 3054 nt5.15□□□□□ -1.59
CDC40P40968 ALD6YPL061W 1503 nt5.14□□□□□ -1.59
CDC40P40968 YLR358CYLR358C 564 nt5.14□□□□□ -1.59
CDC40P40968 YML083CYML083C 1257 nt5.14□□□□□ -1.59
CDC40P40968 PTH2YBL057C 627 nt5.14□□□□□ -1.59
CDC40P40968 PEX7YDR142C 1128 nt5.13□□□□□ -1.59
CDC40P40968 URA3YEL021W 804 nt5.13□□□□□ -1.59
CDC40P40968 PDE1YGL248W 1110 nt5.13□□□□□ -1.59
CDC40P40968 COA1YIL157C 594 nt5.13□□□□□ -1.59
CDC40P40968 PPM2YOL141W 2088 nt5.12□□□□□ -1.59
CDC40P40968 YMR279CYMR279C 1623 nt5.12□□□□□ -1.59
CDC40P40968 IPK1YDR315C 846 nt5.12□□□□□ -1.59
CDC40P40968 YNL120CYNL120C 486 nt5.12□□□□□ -1.59
CDC40P40968 RKI1YOR095C 777 nt5.12□□□□□ -1.59
CDC40P40968 MPE1YKL059C 1326 nt5.12□□□□□ -1.59
CDC40P40968 TUB1YML085C 1344 nt5.12□□□□□ -1.59
CDC40P40968 COR1YBL045C 1374 nt5.12□□□□□ -1.59
CDC40P40968 KEX2YNL238W 2445 nt5.12□□□□□ -1.59
CDC40P40968 VPS1YKR001C 2115 nt5.11□□□□□ -1.59
CDC40P40968 YDR278CYDR278C 318 nt5.11□□□□□ -1.59
CDC40P40968 PUP2YGR253C 783 nt5.11□□□□□ -1.59
CDC40P40968 ERP5YHR110W 639 nt5.11□□□□□ -1.59
CDC40P40968 COQ3YOL096C 939 nt5.11□□□□□ -1.59
CDC40P40968 ECM2YBR065C 1095 nt5.11□□□□□ -1.59
CDC40P40968 YPR123CYPR123C 435 nt5.11□□□□□ -1.59
CDC40P40968 SUE1YPR151C 621 nt5.11□□□□□ -1.59
CDC40P40968 RCK1YGL158W 1539 nt5.1□□□□□ -1.59
CDC40P40968 PTC7YHR076W 1032 nt5.1□□□□□ -1.59
CDC40P40968 VPS70YJR126C 2436 nt5.1□□□□□ -1.59
CDC40P40968 PTR2YKR093W 1806 nt5.1□□□□□ -1.59
CDC40P40968 RPR1RPR1 369 nt5.1□□□□□ -1.59
CDC40P40968 YPL067CYPL067C 597 nt5.1□□□□□ -1.59
CDC40P40968 YPL250W-AYPL250W-A 288 nt5.1□□□□□ -1.59
CDC40P40968 HAL1YPR005C 885 nt5.1□□□□□ -1.59
CDC40P40968 VPS4YPR173C 1314 nt5.1□□□□□ -1.59
CDC40P40968 GPA2YER020W 1350 nt5.09□□□□□ -1.59
CDC40P40968 HSP104YLL026W 2727 nt5.09□□□□□ -1.59
CDC40P40968 SRG1SRG1 551 nt5.09□□□□□ -1.59
CDC40P40968 RPL7AYGL076C 735 nt5.09□□□□□ -1.59
CDC40P40968 YHR095WYHR095W 495 nt5.09□□□□□ -1.59
CDC40P40968 ATG36YJL185C 882 nt5.09□□□□□ -1.59
CDC40P40968 AIM24YJR080C 1185 nt5.09□□□□□ -1.59
CDC40P40968 KAE1YKR038C 1161 nt5.09□□□□□ -1.59
CDC40P40968 RPL7BYPL198W 735 nt5.09□□□□□ -1.59
CDC40P40968 RAD53YPL153C 2466 nt5.09□□□□□ -1.59
CDC40P40968 ATG1YGL180W 2694 nt5.09□□□□□ -1.6
CDC40P40968 UBX2YML013W 1755 nt5.09□□□□□ -1.6
CDC40P40968 MKK2YPL140C 1521 nt5.08□□□□□ -1.6
CDC40P40968 DML1YMR211W 1428 nt5.08□□□□□ -1.6
CDC40P40968 SPG1YGR236C 288 nt5.08□□□□□ -1.6
CDC40P40968 YML079WYML079W 606 nt5.08□□□□□ -1.6
CDC40P40968 ECM3YOR092W 1842 nt5.08□□□□□ -1.6
CDC40P40968 GPB2YAL056W 2643 nt5.08□□□□□ -1.6
CDC40P40968 VMA13YPR036W 1437 nt5.07□□□□□ -1.6
CDC40P40968 MRPS28YDR337W 861 nt5.07□□□□□ -1.6
CDC40P40968 GET4YOR164C 939 nt5.07□□□□□ -1.6
CDC40P40968 SFB3YHR098C 2790 nt5.07□□□□□ -1.6
CDC40P40968 COX20YDR231C 618 nt5.06□□□□□ -1.6
CDC40P40968 NTG2YOL043C 1143 nt5.06□□□□□ -1.6
CDC40P40968 SCP1YOR367W 603 nt5.06□□□□□ -1.6
CDC40P40968 NHP6BYBR089C-A 300 nt5.06□□□□□ -1.6
CDC40P40968 MSC3YLR219W 2187 nt5.06□□□□□ -1.6
CDC40P40968 CNE1YAL058W 1509 nt5.06□□□□□ -1.6
CDC40P40968 ARB1YER036C 1833 nt5.06□□□□□ -1.6
CDC40P40968 PLB2YMR006C 2121 nt5.06□□□□□ -1.6
CDC40P40968 UTP4YDR324C 2331 nt5.06□□□□□ -1.6
CDC40P40968 TNA1YGR260W 1605 nt5.05□□□□□ -1.6
CDC40P40968 MRS1YIR021W 1092 nt5.05□□□□□ -1.6
CDC40P40968 YIR042CYIR042C 711 nt5.05□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 68.6 ms