Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LONRF2P2-201ENST00000439212 571 ntBASIC18.82■□□□□ 0.6
CD28P10747 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD28P10747 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CD28P10747 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CD28P10747 BX255925.1-201ENST00000566954 1854 ntBASIC18.82■□□□□ 0.6
CD28P10747 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CD28P10747 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CD28P10747 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD28P10747 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CD28P10747 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD28P10747 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD28P10747 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CD28P10747 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD28P10747 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.81■□□□□ 0.6
CD28P10747 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CD28P10747 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CD28P10747 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CD28P10747 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.8■□□□□ 0.6
CD28P10747 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.8■□□□□ 0.6
CD28P10747 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.8■□□□□ 0.6
CD28P10747 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CD28P10747 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.79■□□□□ 0.6
CD28P10747 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD28P10747 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD28P10747 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CD28P10747 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.79■□□□□ 0.6
CD28P10747 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CD28P10747 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.79■□□□□ 0.6
CD28P10747 AC142472.1-201ENST00000612013 1741 ntBASIC18.79■□□□□ 0.6
CD28P10747 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CD28P10747 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CD28P10747 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.78■□□□□ 0.6
CD28P10747 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CD28P10747 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CD28P10747 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CD28P10747 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CD28P10747 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD28P10747 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
CD28P10747 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD28P10747 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD28P10747 GUSBP5-201ENST00000418136 578 ntBASIC18.77■□□□□ 0.6
CD28P10747 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.77■□□□□ 0.6
CD28P10747 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.77■□□□□ 0.6
CD28P10747 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CD28P10747 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CD28P10747 AP004609.3-201ENST00000610705 1884 ntBASIC18.76■□□□□ 0.59
CD28P10747 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CD28P10747 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.76■□□□□ 0.59
CD28P10747 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CD28P10747 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.76■□□□□ 0.59
CD28P10747 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CD28P10747 KRT18P10-201ENST00000388836 1287 ntBASIC18.75■□□□□ 0.59
CD28P10747 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CD28P10747 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.75■□□□□ 0.59
CD28P10747 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
CD28P10747 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.74■□□□□ 0.59
CD28P10747 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CD28P10747 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD28P10747 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.74■□□□□ 0.59
CD28P10747 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CD28P10747 AC239859.2-201ENST00000444165 318 ntBASIC18.74■□□□□ 0.59
CD28P10747 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.74■□□□□ 0.59
CD28P10747 AC131212.1-201ENST00000613771 668 ntBASIC18.74■□□□□ 0.59
CD28P10747 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CD28P10747 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CD28P10747 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD28P10747 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD28P10747 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CD28P10747 THA1P-201ENST00000590384 1145 ntBASIC18.72■□□□□ 0.59
CD28P10747 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.72■□□□□ 0.59
CD28P10747 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CD28P10747 AC142086.6-201ENST00000621154 1765 ntBASIC18.71■□□□□ 0.59
CD28P10747 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
CD28P10747 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.71■□□□□ 0.59
CD28P10747 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CD28P10747 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CD28P10747 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD28P10747 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD28P10747 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.7■□□□□ 0.58
CD28P10747 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.7■□□□□ 0.58
CD28P10747 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CD28P10747 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD28P10747 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.69■□□□□ 0.58
CD28P10747 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.69■□□□□ 0.58
CD28P10747 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD28P10747 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CD28P10747 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CD28P10747 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.69■□□□□ 0.58
CD28P10747 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
CD28P10747 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CD28P10747 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.68■□□□□ 0.58
CD28P10747 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD28P10747 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.68■□□□□ 0.58
CD28P10747 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD28P10747 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CD28P10747 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CD28P10747 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD28P10747 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.67■□□□□ 0.58
CD28P10747 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CD28P10747 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms