Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA1P0DJI8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA1P0DJI8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.32■□□□□ 0.68
SAA1P0DJI8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA1P0DJI8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA1P0DJI8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA1P0DJI8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA1P0DJI8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SAA1P0DJI8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA1P0DJI8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SAA1P0DJI8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SAA1P0DJI8 AC025884.2-201ENST00000553429 711 ntBASIC19.31■□□□□ 0.68
SAA1P0DJI8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA1P0DJI8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA1P0DJI8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SAA1P0DJI8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.31■□□□□ 0.68
SAA1P0DJI8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SAA1P0DJI8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAA1P0DJI8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SAA1P0DJI8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.3■□□□□ 0.68
SAA1P0DJI8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.3■□□□□ 0.68
SAA1P0DJI8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.3■□□□□ 0.68
SAA1P0DJI8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.3■□□□□ 0.68
SAA1P0DJI8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SAA1P0DJI8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SAA1P0DJI8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SAA1P0DJI8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.29■□□□□ 0.68
SAA1P0DJI8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.29■□□□□ 0.68
SAA1P0DJI8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA1P0DJI8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA1P0DJI8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SAA1P0DJI8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.28■□□□□ 0.68
SAA1P0DJI8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.28■□□□□ 0.68
SAA1P0DJI8 AC092296.2-201ENST00000589470 999 ntBASIC19.28■□□□□ 0.68
SAA1P0DJI8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SAA1P0DJI8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA1P0DJI8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SAA1P0DJI8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA1P0DJI8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SAA1P0DJI8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SAA1P0DJI8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SAA1P0DJI8 MIR3960-201ENST00000583311 91 ntBASIC19.27■□□□□ 0.68
SAA1P0DJI8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SAA1P0DJI8 AC142381.3-201ENST00000568208 1670 ntBASIC19.27■□□□□ 0.67
SAA1P0DJI8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SAA1P0DJI8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SAA1P0DJI8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SAA1P0DJI8 SMPD5-203ENST00000639008 1464 ntBASIC19.26■□□□□ 0.67
SAA1P0DJI8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SAA1P0DJI8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.26■□□□□ 0.67
SAA1P0DJI8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.26■□□□□ 0.67
SAA1P0DJI8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 AC022211.4-201ENST00000625094 2161 ntBASIC19.25■□□□□ 0.67
SAA1P0DJI8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.25■□□□□ 0.67
SAA1P0DJI8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SAA1P0DJI8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 AC022413.1-201ENST00000624602 984 ntBASIC19.25■□□□□ 0.67
SAA1P0DJI8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SAA1P0DJI8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SAA1P0DJI8 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.25■□□□□ 0.67
SAA1P0DJI8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA1P0DJI8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.24■□□□□ 0.67
SAA1P0DJI8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.24■□□□□ 0.67
SAA1P0DJI8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA1P0DJI8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA1P0DJI8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SAA1P0DJI8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SAA1P0DJI8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SAA1P0DJI8 AC097639.1-201ENST00000565519 1891 ntBASIC19.23■□□□□ 0.67
SAA1P0DJI8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SAA1P0DJI8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.23■□□□□ 0.67
SAA1P0DJI8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SAA1P0DJI8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SAA1P0DJI8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA1P0DJI8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.22■□□□□ 0.67
SAA1P0DJI8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SAA1P0DJI8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA1P0DJI8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SAA1P0DJI8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SAA1P0DJI8 ECEL1P2-201ENST00000461596 1295 ntBASIC19.22■□□□□ 0.67
SAA1P0DJI8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SAA1P0DJI8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SAA1P0DJI8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SAA1P0DJI8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SAA1P0DJI8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA1P0DJI8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SAA1P0DJI8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SAA1P0DJI8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.21■□□□□ 0.67
SAA1P0DJI8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SAA1P0DJI8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.2■□□□□ 0.66
SAA1P0DJI8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.2■□□□□ 0.66
SAA1P0DJI8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SAA1P0DJI8 AC138932.3-201ENST00000567634 1902 ntBASIC19.19■□□□□ 0.66
SAA1P0DJI8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SAA1P0DJI8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms