Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
RB1P06400 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.82■■□□□ 1.72
RB1P06400 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.82■■□□□ 1.72
RB1P06400 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RB1P06400 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
RB1P06400 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RB1P06400 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.81■■□□□ 1.72
RB1P06400 AC092028.1-203ENST00000608262 953 ntBASIC25.81■■□□□ 1.72
RB1P06400 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
RB1P06400 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
RB1P06400 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
RB1P06400 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
RB1P06400 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
RB1P06400 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC25.8■■□□□ 1.72
RB1P06400 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RB1P06400 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
RB1P06400 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RB1P06400 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RB1P06400 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
RB1P06400 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.79■■□□□ 1.72
RB1P06400 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
RB1P06400 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
RB1P06400 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.79■■□□□ 1.72
RB1P06400 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.79■■□□□ 1.72
RB1P06400 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.79■■□□□ 1.72
RB1P06400 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RB1P06400 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.78■■□□□ 1.72
RB1P06400 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
RB1P06400 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.78■■□□□ 1.72
RB1P06400 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
RB1P06400 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.77■■□□□ 1.72
RB1P06400 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
RB1P06400 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.76■■□□□ 1.71
RB1P06400 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.76■■□□□ 1.71
RB1P06400 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.76■■□□□ 1.71
RB1P06400 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
RB1P06400 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.75■■□□□ 1.71
RB1P06400 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.75■■□□□ 1.71
RB1P06400 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
RB1P06400 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
RB1P06400 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
RB1P06400 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.74■■□□□ 1.71
RB1P06400 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
RB1P06400 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
RB1P06400 AC131281.2-201ENST00000520478 145 ntBASIC25.74■■□□□ 1.71
RB1P06400 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.74■■□□□ 1.71
RB1P06400 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
RB1P06400 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RB1P06400 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RB1P06400 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RB1P06400 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
RB1P06400 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
RB1P06400 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RB1P06400 AL449106.1-201ENST00000608517 1980 ntBASIC25.73■■□□□ 1.71
RB1P06400 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
RB1P06400 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RB1P06400 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RB1P06400 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.72■■□□□ 1.71
RB1P06400 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.72■■□□□ 1.71
RB1P06400 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.72■■□□□ 1.71
RB1P06400 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.72■■□□□ 1.71
RB1P06400 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.71■■□□□ 1.71
RB1P06400 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RB1P06400 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RB1P06400 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.7
RB1P06400 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.7■■□□□ 1.7
RB1P06400 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.7■■□□□ 1.7
RB1P06400 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RB1P06400 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RB1P06400 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RB1P06400 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RB1P06400 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
RB1P06400 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
RB1P06400 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
RB1P06400 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.69■■□□□ 1.7
RB1P06400 AL136116.3-201ENST00000402907 1138 ntBASIC25.69■■□□□ 1.7
RB1P06400 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RB1P06400 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RB1P06400 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RB1P06400 MIR4281-201ENST00000580852 62 ntBASIC25.68■■□□□ 1.7
RB1P06400 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.68■■□□□ 1.7
RB1P06400 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RB1P06400 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RB1P06400 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
RB1P06400 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RB1P06400 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.67■■□□□ 1.7
RB1P06400 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.67■■□□□ 1.7
RB1P06400 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RB1P06400 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
RB1P06400 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.66■■□□□ 1.7
RB1P06400 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
RB1P06400 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.66■■□□□ 1.7
RB1P06400 MIR3621-201ENST00000580529 85 ntBASIC25.66■■□□□ 1.7
RB1P06400 AC010997.5-201ENST00000609182 354 ntBASIC25.66■■□□□ 1.7
RB1P06400 AL117332.1-201ENST00000622628 974 ntBASIC25.66■■□□□ 1.7
RB1P06400 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.66■■□□□ 1.7
RB1P06400 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RB1P06400 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
RB1P06400 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
RB1P06400 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms