Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HMGN1P05114 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
HMGN1P05114 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
HMGN1P05114 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGN1P05114 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGN1P05114 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGN1P05114 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGN1P05114 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
HMGN1P05114 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
HMGN1P05114 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
HMGN1P05114 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HMGN1P05114 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.63■■□□□ 1.05
HMGN1P05114 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.63■■□□□ 1.05
HMGN1P05114 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
HMGN1P05114 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGN1P05114 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGN1P05114 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HMGN1P05114 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.62■■□□□ 1.05
HMGN1P05114 AP003733.4-201ENST00000623785 1697 ntBASIC21.62■■□□□ 1.05
HMGN1P05114 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.62■■□□□ 1.05
HMGN1P05114 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGN1P05114 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.61■■□□□ 1.05
HMGN1P05114 HLA-V-202ENST00000446817 847 ntBASIC21.61■■□□□ 1.05
HMGN1P05114 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
HMGN1P05114 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HMGN1P05114 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGN1P05114 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGN1P05114 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HMGN1P05114 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HMGN1P05114 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.6■■□□□ 1.05
HMGN1P05114 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGN1P05114 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGN1P05114 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HMGN1P05114 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HMGN1P05114 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HMGN1P05114 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGN1P05114 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGN1P05114 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.59■■□□□ 1.05
HMGN1P05114 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGN1P05114 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.59■■□□□ 1.05
HMGN1P05114 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.59■■□□□ 1.05
HMGN1P05114 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HMGN1P05114 AC126177.7-201ENST00000547904 679 ntBASIC21.59■■□□□ 1.05
HMGN1P05114 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HMGN1P05114 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HMGN1P05114 AC097639.1-201ENST00000565519 1891 ntBASIC21.58■■□□□ 1.05
HMGN1P05114 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.58■■□□□ 1.05
HMGN1P05114 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HMGN1P05114 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HMGN1P05114 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
HMGN1P05114 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HMGN1P05114 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HMGN1P05114 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HMGN1P05114 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGN1P05114 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HMGN1P05114 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGN1P05114 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGN1P05114 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGN1P05114 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
HMGN1P05114 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.57■■□□□ 1.04
HMGN1P05114 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HMGN1P05114 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.57■■□□□ 1.04
HMGN1P05114 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.57■■□□□ 1.04
HMGN1P05114 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.56■■□□□ 1.04
HMGN1P05114 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGN1P05114 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGN1P05114 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HMGN1P05114 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGN1P05114 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGN1P05114 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
HMGN1P05114 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HMGN1P05114 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGN1P05114 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HMGN1P05114 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGN1P05114 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGN1P05114 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.55■■□□□ 1.04
HMGN1P05114 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
HMGN1P05114 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGN1P05114 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGN1P05114 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGN1P05114 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGN1P05114 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGN1P05114 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGN1P05114 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGN1P05114 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.54■■□□□ 1.04
HMGN1P05114 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGN1P05114 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HMGN1P05114 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGN1P05114 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGN1P05114 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGN1P05114 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGN1P05114 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms