Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBP04435 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBP04435 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.42■□□□□ 0.86
TCRBP04435 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBP04435 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TCRBP04435 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBP04435 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBP04435 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBP04435 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBP04435 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TCRBP04435 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBP04435 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBP04435 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBP04435 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBP04435 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBP04435 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TCRBP04435 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBP04435 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.4■□□□□ 0.86
TCRBP04435 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBP04435 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBP04435 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBP04435 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.4■□□□□ 0.86
TCRBP04435 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBP04435 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBP04435 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBP04435 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBP04435 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TCRBP04435 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
TCRBP04435 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBP04435 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBP04435 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBP04435 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBP04435 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBP04435 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBP04435 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBP04435 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBP04435 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBP04435 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
TCRBP04435 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBP04435 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBP04435 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TCRBP04435 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBP04435 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBP04435 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBP04435 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TCRBP04435 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBP04435 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBP04435 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBP04435 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBP04435 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBP04435 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBP04435 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TCRBP04435 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBP04435 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBP04435 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBP04435 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBP04435 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBP04435 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBP04435 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBP04435 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBP04435 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBP04435 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
TCRBP04435 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.33■□□□□ 0.84
TCRBP04435 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TCRBP04435 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.32■□□□□ 0.84
TCRBP04435 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBP04435 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TCRBP04435 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBP04435 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
TCRBP04435 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TCRBP04435 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBP04435 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBP04435 AC141586.4-201ENST00000624558 1573 ntBASIC20.31■□□□□ 0.84
TCRBP04435 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBP04435 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBP04435 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBP04435 LINC00273-201ENST00000539813 1452 ntBASIC20.3■□□□□ 0.84
TCRBP04435 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TCRBP04435 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.3■□□□□ 0.84
TCRBP04435 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms