Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NPHS1O60500 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NPHS1O60500 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPHS1O60500 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.44■■□□□ 1.34
NPHS1O60500 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPHS1O60500 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NPHS1O60500 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.44■■□□□ 1.34
NPHS1O60500 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.43■■□□□ 1.34
NPHS1O60500 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.43■■□□□ 1.34
NPHS1O60500 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NPHS1O60500 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.43■■□□□ 1.34
NPHS1O60500 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NPHS1O60500 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.43■■□□□ 1.34
NPHS1O60500 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.43■■□□□ 1.34
NPHS1O60500 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NPHS1O60500 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NPHS1O60500 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPHS1O60500 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPHS1O60500 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPHS1O60500 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPHS1O60500 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.42■■□□□ 1.34
NPHS1O60500 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.42■■□□□ 1.34
NPHS1O60500 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPHS1O60500 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.42■■□□□ 1.34
NPHS1O60500 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NPHS1O60500 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
NPHS1O60500 AC097639.1-201ENST00000565519 1891 ntBASIC23.41■■□□□ 1.34
NPHS1O60500 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
NPHS1O60500 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NPHS1O60500 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NPHS1O60500 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NPHS1O60500 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
NPHS1O60500 AC126177.7-201ENST00000547904 679 ntBASIC23.41■■□□□ 1.34
NPHS1O60500 AP003733.4-201ENST00000623785 1697 ntBASIC23.41■■□□□ 1.34
NPHS1O60500 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
NPHS1O60500 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NPHS1O60500 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NPHS1O60500 ZNRF2P2-203ENST00000454624 420 ntBASIC23.4■■□□□ 1.34
NPHS1O60500 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.4■■□□□ 1.34
NPHS1O60500 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NPHS1O60500 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
NPHS1O60500 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NPHS1O60500 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NPHS1O60500 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
NPHS1O60500 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.39■■□□□ 1.33
NPHS1O60500 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.39■■□□□ 1.33
NPHS1O60500 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NPHS1O60500 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NPHS1O60500 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.38■■□□□ 1.33
NPHS1O60500 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.38■■□□□ 1.33
NPHS1O60500 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.38■■□□□ 1.33
NPHS1O60500 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
NPHS1O60500 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.38■■□□□ 1.33
NPHS1O60500 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
NPHS1O60500 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
NPHS1O60500 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NPHS1O60500 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPHS1O60500 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.37■■□□□ 1.33
NPHS1O60500 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NPHS1O60500 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPHS1O60500 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPHS1O60500 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NPHS1O60500 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NPHS1O60500 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
NPHS1O60500 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NPHS1O60500 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
NPHS1O60500 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
NPHS1O60500 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NPHS1O60500 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
NPHS1O60500 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.35■■□□□ 1.33
NPHS1O60500 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPHS1O60500 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPHS1O60500 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPHS1O60500 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NPHS1O60500 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.35■■□□□ 1.33
NPHS1O60500 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPHS1O60500 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPHS1O60500 SLC6A10P-202ENST00000431994 2058 ntBASIC23.34■■□□□ 1.33
NPHS1O60500 CR559946.2-201ENST00000623684 991 ntBASIC23.34■■□□□ 1.33
NPHS1O60500 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.34■■□□□ 1.33
NPHS1O60500 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.34■■□□□ 1.33
NPHS1O60500 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NPHS1O60500 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPHS1O60500 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPHS1O60500 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.33■■□□□ 1.33
NPHS1O60500 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPHS1O60500 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NPHS1O60500 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NPHS1O60500 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NPHS1O60500 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
NPHS1O60500 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
NPHS1O60500 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
NPHS1O60500 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
NPHS1O60500 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
NPHS1O60500 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.32■■□□□ 1.32
NPHS1O60500 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
NPHS1O60500 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
NPHS1O60500 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
NPHS1O60500 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.32■■□□□ 1.32
NPHS1O60500 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms