Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SIRPB1O00241 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIRPB1O00241 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SIRPB1O00241 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIRPB1O00241 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIRPB1O00241 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIRPB1O00241 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.24■□□□□ 0.83
SIRPB1O00241 MIR4449-201ENST00000578365 66 ntBASIC20.24■□□□□ 0.83
SIRPB1O00241 AC092296.2-201ENST00000589470 999 ntBASIC20.24■□□□□ 0.83
SIRPB1O00241 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIRPB1O00241 SMPD5-203ENST00000639008 1464 ntBASIC20.24■□□□□ 0.83
SIRPB1O00241 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.23■□□□□ 0.83
SIRPB1O00241 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPB1O00241 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.23■□□□□ 0.83
SIRPB1O00241 AC025884.2-201ENST00000553429 711 ntBASIC20.23■□□□□ 0.83
SIRPB1O00241 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SIRPB1O00241 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPB1O00241 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
SIRPB1O00241 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIRPB1O00241 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SIRPB1O00241 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SIRPB1O00241 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPB1O00241 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.22■□□□□ 0.83
SIRPB1O00241 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.22■□□□□ 0.83
SIRPB1O00241 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIRPB1O00241 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.21■□□□□ 0.83
SIRPB1O00241 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIRPB1O00241 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIRPB1O00241 MIR3960-201ENST00000583311 91 ntBASIC20.21■□□□□ 0.83
SIRPB1O00241 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.21■□□□□ 0.83
SIRPB1O00241 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SIRPB1O00241 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIRPB1O00241 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIRPB1O00241 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.2■□□□□ 0.82
SIRPB1O00241 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIRPB1O00241 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIRPB1O00241 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.19■□□□□ 0.82
SIRPB1O00241 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIRPB1O00241 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SIRPB1O00241 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIRPB1O00241 ECEL1P2-201ENST00000461596 1295 ntBASIC20.19■□□□□ 0.82
SIRPB1O00241 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIRPB1O00241 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIRPB1O00241 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIRPB1O00241 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.18■□□□□ 0.82
SIRPB1O00241 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIRPB1O00241 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIRPB1O00241 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIRPB1O00241 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.18■□□□□ 0.82
SIRPB1O00241 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SIRPB1O00241 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.18■□□□□ 0.82
SIRPB1O00241 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SIRPB1O00241 GPX1-201ENST00000419349 1106 ntBASIC20.17■□□□□ 0.82
SIRPB1O00241 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.17■□□□□ 0.82
SIRPB1O00241 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SIRPB1O00241 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SIRPB1O00241 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SIRPB1O00241 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.16■□□□□ 0.82
SIRPB1O00241 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIRPB1O00241 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SIRPB1O00241 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SIRPB1O00241 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIRPB1O00241 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SIRPB1O00241 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SIRPB1O00241 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIRPB1O00241 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIRPB1O00241 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIRPB1O00241 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIRPB1O00241 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIRPB1O00241 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIRPB1O00241 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.15■□□□□ 0.82
SIRPB1O00241 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.14■□□□□ 0.81
SIRPB1O00241 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SIRPB1O00241 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.14■□□□□ 0.81
SIRPB1O00241 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIRPB1O00241 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIRPB1O00241 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SIRPB1O00241 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.13■□□□□ 0.81
SIRPB1O00241 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIRPB1O00241 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIRPB1O00241 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SIRPB1O00241 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SIRPB1O00241 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.13■□□□□ 0.81
SIRPB1O00241 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.13■□□□□ 0.81
SIRPB1O00241 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIRPB1O00241 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIRPB1O00241 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.13■□□□□ 0.81
SIRPB1O00241 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.13■□□□□ 0.81
SIRPB1O00241 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SIRPB1O00241 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPB1O00241 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPB1O00241 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SIRPB1O00241 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.12■□□□□ 0.81
SIRPB1O00241 RP9P-202ENST00000450133 1212 ntBASIC20.12■□□□□ 0.81
SIRPB1O00241 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.12■□□□□ 0.81
SIRPB1O00241 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
SIRPB1O00241 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPB1O00241 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIRPB1O00241 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SIRPB1O00241 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms