Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM9A6NGZ8 DUX4L9-201ENST00000449051 1259 ntBASIC17.36■□□□□ 0.37
SMIM9A6NGZ8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM9A6NGZ8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM9A6NGZ8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMIM9A6NGZ8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 ATP5G2P3-201ENST00000429083 425 ntBASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 AC092803.2-201ENST00000564287 1899 ntBASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMIM9A6NGZ8 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 AC004987.1-201ENST00000428627 508 ntBASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMIM9A6NGZ8 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMIM9A6NGZ8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.33■□□□□ 0.36
SMIM9A6NGZ8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMIM9A6NGZ8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.33■□□□□ 0.36
SMIM9A6NGZ8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.33■□□□□ 0.36
SMIM9A6NGZ8 AC074183.2-201ENST00000623112 922 ntBASIC17.33■□□□□ 0.36
SMIM9A6NGZ8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 SPCS2P3-201ENST00000500401 656 ntBASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM9A6NGZ8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM9A6NGZ8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 AC010501.1-201ENST00000606270 1962 ntBASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 AC139795.1-202ENST00000500444 432 ntBASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SMIM9A6NGZ8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 RPS2P7-201ENST00000447334 885 ntBASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC17.29■□□□□ 0.36
SMIM9A6NGZ8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 DUX4L18-201ENST00000553347 1267 ntBASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 AL033527.3-201ENST00000566366 1196 ntBASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 AC087393.1-201ENST00000582896 145 ntBASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM9A6NGZ8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 AC145676.1-201ENST00000514988 2004 ntBASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 BHLHE23-202ENST00000612929 1109 ntBASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.27■□□□□ 0.36
SMIM9A6NGZ8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM9A6NGZ8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM9A6NGZ8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms