Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.47■□□□□ 0.87
MEIS3P1A6NDR6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
MEIS3P1A6NDR6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MEIS3P1A6NDR6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MEIS3P1A6NDR6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
MEIS3P1A6NDR6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
MEIS3P1A6NDR6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
MEIS3P1A6NDR6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MEIS3P1A6NDR6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MEIS3P1A6NDR6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.46■□□□□ 0.87
MEIS3P1A6NDR6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MEIS3P1A6NDR6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MEIS3P1A6NDR6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MEIS3P1A6NDR6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MEIS3P1A6NDR6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
MEIS3P1A6NDR6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MEIS3P1A6NDR6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
MEIS3P1A6NDR6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.44■□□□□ 0.86
MEIS3P1A6NDR6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MEIS3P1A6NDR6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MEIS3P1A6NDR6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MEIS3P1A6NDR6 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MEIS3P1A6NDR6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MEIS3P1A6NDR6 MIR3665-201ENST00000578708 105 ntBASIC20.43■□□□□ 0.86
MEIS3P1A6NDR6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.43■□□□□ 0.86
MEIS3P1A6NDR6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MEIS3P1A6NDR6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
MEIS3P1A6NDR6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MEIS3P1A6NDR6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MEIS3P1A6NDR6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.4■□□□□ 0.86
MEIS3P1A6NDR6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
MEIS3P1A6NDR6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.39■□□□□ 0.86
MEIS3P1A6NDR6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MEIS3P1A6NDR6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MEIS3P1A6NDR6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
MEIS3P1A6NDR6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MEIS3P1A6NDR6 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.39■□□□□ 0.85
MEIS3P1A6NDR6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MEIS3P1A6NDR6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.39■□□□□ 0.85
MEIS3P1A6NDR6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MEIS3P1A6NDR6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MEIS3P1A6NDR6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.39■□□□□ 0.85
MEIS3P1A6NDR6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MEIS3P1A6NDR6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
MEIS3P1A6NDR6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
MEIS3P1A6NDR6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MEIS3P1A6NDR6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MEIS3P1A6NDR6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.37■□□□□ 0.85
MEIS3P1A6NDR6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MEIS3P1A6NDR6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.37■□□□□ 0.85
MEIS3P1A6NDR6 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
MEIS3P1A6NDR6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MEIS3P1A6NDR6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.36■□□□□ 0.85
MEIS3P1A6NDR6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MEIS3P1A6NDR6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MEIS3P1A6NDR6 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MEIS3P1A6NDR6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms