Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LAMB4A4D0S4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LAMB4A4D0S4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.92■■■□□ 2.54
LAMB4A4D0S4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
LAMB4A4D0S4 KRT18P10-201ENST00000388836 1287 ntBASIC30.91■■■□□ 2.54
LAMB4A4D0S4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
LAMB4A4D0S4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
LAMB4A4D0S4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
LAMB4A4D0S4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
LAMB4A4D0S4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.9■■■□□ 2.54
LAMB4A4D0S4 LONRF2P2-201ENST00000439212 571 ntBASIC30.89■■■□□ 2.54
LAMB4A4D0S4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.89■■■□□ 2.54
LAMB4A4D0S4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
LAMB4A4D0S4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.89■■■□□ 2.54
LAMB4A4D0S4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.88■■■□□ 2.53
LAMB4A4D0S4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC30.87■■■□□ 2.53
LAMB4A4D0S4 AC022616.5-201ENST00000518796 181 ntBASIC30.86■■■□□ 2.53
LAMB4A4D0S4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LAMB4A4D0S4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
LAMB4A4D0S4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
LAMB4A4D0S4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.85■■■□□ 2.53
LAMB4A4D0S4 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.85■■■□□ 2.53
LAMB4A4D0S4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
LAMB4A4D0S4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC30.85■■■□□ 2.53
LAMB4A4D0S4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
LAMB4A4D0S4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.85■■■□□ 2.53
LAMB4A4D0S4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
LAMB4A4D0S4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.84■■■□□ 2.53
LAMB4A4D0S4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
LAMB4A4D0S4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
LAMB4A4D0S4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.84■■■□□ 2.53
LAMB4A4D0S4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
LAMB4A4D0S4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
LAMB4A4D0S4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.83■■■□□ 2.53
LAMB4A4D0S4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.82■■■□□ 2.52
LAMB4A4D0S4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.82■■■□□ 2.52
LAMB4A4D0S4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.82■■■□□ 2.52
LAMB4A4D0S4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.82■■■□□ 2.52
LAMB4A4D0S4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
LAMB4A4D0S4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.81■■■□□ 2.52
LAMB4A4D0S4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.81■■■□□ 2.52
LAMB4A4D0S4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LAMB4A4D0S4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
LAMB4A4D0S4 Z92544.1-202ENST00000571933 1220 ntBASIC30.8■■■□□ 2.52
LAMB4A4D0S4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LAMB4A4D0S4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LAMB4A4D0S4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.8■■■□□ 2.52
LAMB4A4D0S4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LAMB4A4D0S4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LAMB4A4D0S4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
LAMB4A4D0S4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.77■■■□□ 2.52
LAMB4A4D0S4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
LAMB4A4D0S4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
LAMB4A4D0S4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LAMB4A4D0S4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.77■■■□□ 2.52
LAMB4A4D0S4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LAMB4A4D0S4 MIR4281-201ENST00000580852 62 ntBASIC30.77■■■□□ 2.52
LAMB4A4D0S4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
LAMB4A4D0S4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC30.76■■■□□ 2.51
LAMB4A4D0S4 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
LAMB4A4D0S4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.76■■■□□ 2.51
LAMB4A4D0S4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LAMB4A4D0S4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
LAMB4A4D0S4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
LAMB4A4D0S4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
LAMB4A4D0S4 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LAMB4A4D0S4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LAMB4A4D0S4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC30.73■■■□□ 2.51
LAMB4A4D0S4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
LAMB4A4D0S4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
LAMB4A4D0S4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC30.73■■■□□ 2.51
LAMB4A4D0S4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LAMB4A4D0S4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.72■■■□□ 2.51
LAMB4A4D0S4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
LAMB4A4D0S4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
LAMB4A4D0S4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms