Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 LINC01124-201ENST00000409786 2117 ntBASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00854A0A1B0GVQ3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00854A0A1B0GVQ3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00854A0A1B0GVQ3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21■□□□□ 0.95
LINC00854A0A1B0GVQ3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00854A0A1B0GVQ3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LINC00854A0A1B0GVQ3 AC142472.1-201ENST00000612013 1741 ntBASIC20.99■□□□□ 0.95
LINC00854A0A1B0GVQ3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00854A0A1B0GVQ3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
LINC00854A0A1B0GVQ3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LINC00854A0A1B0GVQ3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.98■□□□□ 0.95
LINC00854A0A1B0GVQ3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00854A0A1B0GVQ3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00854A0A1B0GVQ3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LINC00854A0A1B0GVQ3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.98■□□□□ 0.95
LINC00854A0A1B0GVQ3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
LINC00854A0A1B0GVQ3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LINC00854A0A1B0GVQ3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.96■□□□□ 0.95
LINC00854A0A1B0GVQ3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LINC00854A0A1B0GVQ3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00854A0A1B0GVQ3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00854A0A1B0GVQ3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
LINC00854A0A1B0GVQ3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00854A0A1B0GVQ3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00854A0A1B0GVQ3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
LINC00854A0A1B0GVQ3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00854A0A1B0GVQ3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00854A0A1B0GVQ3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LINC00854A0A1B0GVQ3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 AC097639.1-201ENST00000565519 1891 ntBASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC00854A0A1B0GVQ3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00854A0A1B0GVQ3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00854A0A1B0GVQ3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.94
LINC00854A0A1B0GVQ3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00854A0A1B0GVQ3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00854A0A1B0GVQ3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00854A0A1B0GVQ3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00854A0A1B0GVQ3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms