Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV21A0A0B4J279 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV21A0A0B4J279 HLA-V-202ENST00000446817 847 ntBASIC17.77■□□□□ 0.44
TRAV21A0A0B4J279 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV21A0A0B4J279 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV21A0A0B4J279 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV21A0A0B4J279 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV21A0A0B4J279 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV21A0A0B4J279 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV21A0A0B4J279 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 AC138932.3-201ENST00000567634 1902 ntBASIC17.74■□□□□ 0.43
TRAV21A0A0B4J279 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 ZNRF2P2-203ENST00000454624 420 ntBASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV21A0A0B4J279 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV21A0A0B4J279 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV21A0A0B4J279 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAV21A0A0B4J279 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV21A0A0B4J279 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV21A0A0B4J279 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.71■□□□□ 0.43
TRAV21A0A0B4J279 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV21A0A0B4J279 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV21A0A0B4J279 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV21A0A0B4J279 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV21A0A0B4J279 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV21A0A0B4J279 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.7■□□□□ 0.42
TRAV21A0A0B4J279 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 AL139125.2-201ENST00000623134 1869 ntBASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC17.69■□□□□ 0.42
TRAV21A0A0B4J279 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRAV21A0A0B4J279 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV21A0A0B4J279 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms