Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 CHCHD2P8-201ENST00000429873 447 ntBASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 GUSBP12-201ENST00000513727 720 ntBASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 AC004263.2-201ENST00000617183 678 ntBASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.36■□□□□ 0.21
AP4B1Q9Y6B7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 AC092384.3-202ENST00000564646 2873 ntBASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 ATP5G2P1-201ENST00000433580 426 ntBASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 AC093458.2-201ENST00000623150 629 ntBASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP4B1Q9Y6B7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 IGHV3-41-201ENST00000613121 348 ntBASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP4B1Q9Y6B7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms