Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 PAWRP1-201ENST00000451083 565 ntBASIC19.35■□□□□ 0.69
CLIC4Q9Y696 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 AC025062.2-201ENST00000605477 670 ntBASIC19.35■□□□□ 0.69
CLIC4Q9Y696 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 AC005052.1-201ENST00000625181 2492 ntBASIC19.35■□□□□ 0.69
CLIC4Q9Y696 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLIC4Q9Y696 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 PTCHD3P3-201ENST00000403073 906 ntBASIC19.34■□□□□ 0.69
CLIC4Q9Y696 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 AC021087.4-201ENST00000563761 564 ntBASIC19.34■□□□□ 0.69
CLIC4Q9Y696 AC139887.3-201ENST00000568585 713 ntBASIC19.34■□□□□ 0.69
CLIC4Q9Y696 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CLIC4Q9Y696 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 AC006277.1-201ENST00000624348 1610 ntBASIC19.33■□□□□ 0.69
CLIC4Q9Y696 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 AC006504.4-201ENST00000592118 1568 ntBASIC19.33■□□□□ 0.69
CLIC4Q9Y696 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLIC4Q9Y696 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLIC4Q9Y696 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIC4Q9Y696 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms