Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAI2Q9Y5P3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AL021920.2-201ENST00000624828 1351 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 CRYGEP-201ENST00000412192 528 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 VN2R19P-201ENST00000442399 1052 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AL591424.1-201ENST00000442569 1213 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 DNAJB3-201ENST00000446806 729 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 DNAJB3-202ENST00000449667 1266 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AC020916.1-201ENST00000587762 1774 ntBASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAI2Q9Y5P3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
RAI2Q9Y5P3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 TUBB8P12-201ENST00000308911 1335 ntBASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 TUBB7P-202ENST00000428444 1305 ntBASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 KRT18P28-201ENST00000453838 1332 ntBASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 TUBB8P7-204ENST00000567960 1332 ntBASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAI2Q9Y5P3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
RAI2Q9Y5P3 AC022211.2-201ENST00000585075 2527 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms