Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 TSPY15P-201ENST00000457163 923 ntBASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 REXO1L10P-201ENST00000615707 1290 ntBASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 REXO1L12P-201ENST00000622156 912 ntBASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UBQLN2Q9UHD9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 MTHFR-217ENST00000641820 1569 ntBASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 LINC02012-201ENST00000608206 1725 ntBASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 RCC2P3-201ENST00000418112 1537 ntBASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBQLN2Q9UHD9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UBQLN2Q9UHD9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms