Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 GPS2P2-201ENST00000430745 888 ntBASIC20.32■□□□□ 0.84
SALL1Q9NSC2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 KRT8P23-201ENST00000560090 1207 ntBASIC20.32■□□□□ 0.84
SALL1Q9NSC2 AC025678.2-201ENST00000562061 970 ntBASIC20.32■□□□□ 0.84
SALL1Q9NSC2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.32■□□□□ 0.84
SALL1Q9NSC2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 FAM58DP-201ENST00000428076 619 ntBASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AC005237.2-201ENST00000434368 219 ntBASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AL512356.2-201ENST00000546955 174 ntBASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AC004449.1-201ENST00000564240 433 ntBASIC20.31■□□□□ 0.84
SALL1Q9NSC2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 CYP2A7P1-201ENST00000595391 815 ntBASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AC106028.4-201ENST00000614509 607 ntBASIC20.31■□□□□ 0.84
SALL1Q9NSC2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SALL1Q9NSC2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SALL1Q9NSC2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 LINC00895-201ENST00000629028 1637 ntBASIC20.29■□□□□ 0.84
SALL1Q9NSC2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.29■□□□□ 0.84
SALL1Q9NSC2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms