Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 AC015909.5-201ENST00000624336 2266 ntBASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 AC010491.1-201ENST00000563101 2797 ntBASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 STRCP1-201ENST00000509801 5328 ntBASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 AC136759.1-202ENST00000530858 2194 ntBASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 LINC00304-203ENST00000565008 1864 ntBASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC8.62□□□□□ -1.03
CDC42SE1Q9NRR8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TP73-211ENST00000604074 4806 ntTSL 5 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 NUTM2HP-201ENST00000442076 2498 ntBASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC8.61□□□□□ -1.03
CDC42SE1Q9NRR8 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms