Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C12orf4Q9NQ89 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 LINC01568-207ENST00000641790 1380 ntBASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 PRAL-201ENST00000624952 3286 ntBASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 TSPY12P-201ENST00000421279 868 ntBASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 TSPY15P-201ENST00000457163 923 ntBASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 AL136038.4-201ENST00000603606 1261 ntBASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 KRT18P22-201ENST00000402024 1347 ntBASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C12orf4Q9NQ89 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 AC005104.2-201ENST00000427818 678 ntBASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 RASA4DP-201ENST00000460726 1199 ntBASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 TMEM191A-211ENST00000637163 1067 ntBASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
C12orf4Q9NQ89 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
C12orf4Q9NQ89 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
C12orf4Q9NQ89 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.83□□□□□ -0.03
C12orf4Q9NQ89 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
C12orf4Q9NQ89 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.83□□□□□ -0.03
C12orf4Q9NQ89 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms