Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 PCDHB17P-201ENST00000539533 2393 ntBASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 AC132008.2-207ENST00000454517 770 ntBASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 FOSL1P1-201ENST00000511041 816 ntBASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NEUROD4Q9HD90 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 UNC93B7-201ENST00000509439 705 ntBASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 AL353135.1-201ENST00000606729 504 ntBASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 IFNL4P1-201ENST00000607083 540 ntBASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 AL121772.3-201ENST00000610840 674 ntBASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.04■□□□□ 0.16
NEUROD4Q9HD90 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 AP000347.1-202ENST00000435868 847 ntBASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 DUX4L17-201ENST00000557360 1267 ntBASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NEUROD4Q9HD90 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms