Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 AC011676.5-201ENST00000624864 2660 ntBASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 AC073592.4-201ENST00000623827 446 ntBASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 AC005915.1-201ENST00000624912 2018 ntBASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC68Q9H2F9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 RBM17P3-201ENST00000417687 1192 ntBASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 AP001269.4-201ENST00000609611 512 ntBASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 AL732292.2-201ENST00000609649 430 ntBASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 AL162727.3-201ENST00000635661 2787 ntBASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC68Q9H2F9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC68Q9H2F9 AC092068.3-201ENST00000587894 2016 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms