Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 FRMD8P1-201ENST00000440433 1524 ntBASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 AC016396.2-201ENST00000562575 1417 ntBASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 AC008738.7-201ENST00000609744 511 ntBASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 TEX28P1-201ENST00000613479 1221 ntBASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 TEX28P2-201ENST00000617764 1221 ntBASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 AC093525.9-201ENST00000624961 1746 ntBASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RTFDC1Q9BY42 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RTFDC1Q9BY42 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTFDC1Q9BY42 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTFDC1Q9BY42 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.39■□□□□ 0.86
RTFDC1Q9BY42 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RTFDC1Q9BY42 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.39■□□□□ 0.86
RTFDC1Q9BY42 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 MIR6752-201ENST00000618442 71 ntBASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.39■□□□□ 0.85
RTFDC1Q9BY42 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 AL021920.2-201ENST00000624828 1351 ntBASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 FAM220BP-201ENST00000377689 816 ntBASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 AL138688.1-201ENST00000624851 1594 ntBASIC20.38■□□□□ 0.85
RTFDC1Q9BY42 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 U91328.1-201ENST00000437528 223 ntBASIC20.37■□□□□ 0.85
RTFDC1Q9BY42 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms