Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 AC093525.9-201ENST00000624961 1746 ntBASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 C2orf69P3-201ENST00000565542 1120 ntBASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 AL512604.3-201ENST00000569583 964 ntBASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSBP4Q9BWG4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 AC009947.2-201ENST00000444014 672 ntBASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 EGLN1P1-201ENST00000531623 762 ntBASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 AL139327.4-201ENST00000612362 153 ntBASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SSBP4Q9BWG4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms