Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS2Q99743 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NPAS2Q99743 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 AKR1C7P-201ENST00000305623 895 ntBASIC16.66■□□□□ 0.26
NPAS2Q99743 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS2Q99743 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 NUS1P2-201ENST00000417358 873 ntBASIC16.66■□□□□ 0.26
NPAS2Q99743 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS2Q99743 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS2Q99743 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 AC079781.3-201ENST00000449110 356 ntBASIC16.66■□□□□ 0.26
NPAS2Q99743 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS2Q99743 MINOS1P3-201ENST00000457048 203 ntBASIC16.66■□□□□ 0.26
NPAS2Q99743 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.66■□□□□ 0.26
NPAS2Q99743 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS2Q99743 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.66■□□□□ 0.26
NPAS2Q99743 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.66■□□□□ 0.26
NPAS2Q99743 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 AC104692.2-201ENST00000603054 253 ntBASIC16.66■□□□□ 0.26
NPAS2Q99743 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.66■□□□□ 0.26
NPAS2Q99743 AL031008.1-201ENST00000619963 541 ntBASIC16.66■□□□□ 0.26
NPAS2Q99743 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NPAS2Q99743 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS2Q99743 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS2Q99743 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.66■□□□□ 0.26
NPAS2Q99743 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NPAS2Q99743 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
NPAS2Q99743 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NPAS2Q99743 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPAS2Q99743 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.65■□□□□ 0.26
NPAS2Q99743 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPAS2Q99743 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS2Q99743 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS2Q99743 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS2Q99743 MTCL1P1-201ENST00000446207 792 ntBASIC16.65■□□□□ 0.26
NPAS2Q99743 AC002558.1-201ENST00000488906 803 ntBASIC16.65■□□□□ 0.26
NPAS2Q99743 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS2Q99743 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.65■□□□□ 0.26
NPAS2Q99743 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.65■□□□□ 0.26
NPAS2Q99743 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPAS2Q99743 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.65■□□□□ 0.26
NPAS2Q99743 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.65■□□□□ 0.26
NPAS2Q99743 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
NPAS2Q99743 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.65■□□□□ 0.26
NPAS2Q99743 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NPAS2Q99743 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
NPAS2Q99743 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPAS2Q99743 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS2Q99743 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.65■□□□□ 0.26
NPAS2Q99743 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NPAS2Q99743 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
NPAS2Q99743 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.64■□□□□ 0.26
NPAS2Q99743 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.64■□□□□ 0.26
NPAS2Q99743 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms