Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.71■□□□□ 0.75
CHAMP1Q96JM3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 BCL2-203ENST00000589955 5011 ntBASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 AC011467.2-201ENST00000598425 242 ntBASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 TP73-AS1-210ENST00000637775 1455 ntBASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 AC010491.1-201ENST00000563101 2797 ntBASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 AC016734.2-201ENST00000624325 1377 ntBASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHAMP1Q96JM3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 AL365203.3-201ENST00000609742 2057 ntBASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 KRT8P26-201ENST00000534154 1276 ntBASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CHAMP1Q96JM3 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 AC090616.6-201ENST00000582640 721 ntBASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 AC103702.1-201ENST00000548801 2630 ntBASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.68■□□□□ 0.74
CHAMP1Q96JM3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHAMP1Q96JM3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHAMP1Q96JM3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
CHAMP1Q96JM3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CHAMP1Q96JM3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.67■□□□□ 0.74
CHAMP1Q96JM3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CHAMP1Q96JM3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms