Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PDLIM5Q96HC4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 AC129492.6-201ENST00000611383 1305 ntBASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 KRT18P67-201ENST00000432816 1264 ntBASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 AC105339.3-201ENST00000560043 636 ntBASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 SNX33P1-201ENST00000592116 1762 ntBASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.55■□□□□ 0.24
PDLIM5Q96HC4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 RPS2P28-201ENST00000314255 741 ntBASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 HNRNPDP1-201ENST00000439535 754 ntBASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 AF186996.4-201ENST00000467186 377 ntBASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 IGHV3-65-201ENST00000523210 341 ntBASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 AC107918.2-201ENST00000530817 355 ntBASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDLIM5Q96HC4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 PCDHB19P-201ENST00000570871 2371 ntBASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 FAAHP1-202ENST00000446499 1238 ntBASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.53■□□□□ 0.24
PDLIM5Q96HC4 AL356488.2-201ENST00000602755 427 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms