Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC3Q92529 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SHC3Q92529 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.07■□□□□ 0.48
SHC3Q92529 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 AL773604.1-201ENST00000617417 272 ntBASIC18.07■□□□□ 0.48
SHC3Q92529 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SHC3Q92529 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.07■□□□□ 0.48
SHC3Q92529 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC3Q92529 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SHC3Q92529 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC3Q92529 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.07■□□□□ 0.48
SHC3Q92529 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 SLC22A20-204ENST00000530038 1673 ntBASIC18.06■□□□□ 0.48
SHC3Q92529 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.06■□□□□ 0.48
SHC3Q92529 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.06■□□□□ 0.48
SHC3Q92529 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.06■□□□□ 0.48
SHC3Q92529 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
SHC3Q92529 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 AL049840.3-201ENST00000602669 611 ntBASIC18.06■□□□□ 0.48
SHC3Q92529 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.06■□□□□ 0.48
SHC3Q92529 AC117500.6-201ENST00000624871 588 ntBASIC18.06■□□□□ 0.48
SHC3Q92529 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 PCDHB19P-201ENST00000570871 2371 ntBASIC18.06■□□□□ 0.48
SHC3Q92529 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SHC3Q92529 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SHC3Q92529 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SHC3Q92529 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC3Q92529 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
SHC3Q92529 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC3Q92529 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 MRPL3P1-201ENST00000400109 1033 ntBASIC18.05■□□□□ 0.48
SHC3Q92529 AL031284.1-201ENST00000419297 478 ntBASIC18.05■□□□□ 0.48
SHC3Q92529 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC3Q92529 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC3Q92529 OR7E47P-204ENST00000575924 449 ntBASIC18.05■□□□□ 0.48
SHC3Q92529 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.05■□□□□ 0.48
SHC3Q92529 AC005593.1-201ENST00000624894 515 ntBASIC18.05■□□□□ 0.48
SHC3Q92529 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.05■□□□□ 0.48
SHC3Q92529 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SHC3Q92529 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SHC3Q92529 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SHC3Q92529 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SHC3Q92529 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.04■□□□□ 0.48
SHC3Q92529 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SHC3Q92529 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 AC129492.6-201ENST00000611383 1305 ntBASIC18.04■□□□□ 0.48
SHC3Q92529 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.04■□□□□ 0.48
SHC3Q92529 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SHC3Q92529 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SHC3Q92529 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms