Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 FAM8A6P-201ENST00000407496 1135 ntBASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 MIR1224-201ENST00000408193 85 ntBASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 GPR32P1-201ENST00000601788 811 ntBASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 HYMAI-201ENST00000635591 3347 ntBASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.99■□□□□ 0.31
RAB3IL1Q8TBN0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 TUBB8P12-201ENST00000308911 1335 ntBASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 TUBB7P-202ENST00000428444 1305 ntBASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 TUBB8P7-204ENST00000567960 1332 ntBASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 AC122714.2-201ENST00000502787 707 ntBASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 AC111152.3-201ENST00000569699 673 ntBASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 GPR89P-201ENST00000407924 1495 ntBASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 MTHFR-217ENST00000641820 1569 ntBASIC16.98■□□□□ 0.31
RAB3IL1Q8TBN0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAB3IL1Q8TBN0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms