Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 AC008667.4-201ENST00000607370 168 ntBASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SRFBP1Q8NEF9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SRFBP1Q8NEF9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.21■□□□□ 0.18
SRFBP1Q8NEF9 AC092068.3-201ENST00000587894 2016 ntBASIC16.21■□□□□ 0.18
SRFBP1Q8NEF9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRFBP1Q8NEF9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SRFBP1Q8NEF9 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 AC084018.2-201ENST00000613093 2607 ntBASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 AP001005.1-201ENST00000571755 1248 ntBASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 AD000864.1-201ENST00000624076 2295 ntBASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.2■□□□□ 0.18
SRFBP1Q8NEF9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 KRT8P49-201ENST00000604166 1432 ntBASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.19■□□□□ 0.18
SRFBP1Q8NEF9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms