Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 AP002490.2-201ENST00000524791 560 ntBASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 AL671883.3-201ENST00000603274 991 ntBASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 FAM197Y3-203ENST00000618346 717 ntBASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZIC4Q8N9L1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 AC131009.4-201ENST00000624048 1740 ntBASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 NKILA-202ENST00000614771 2598 ntBASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 AC009053.2-201ENST00000563701 2365 ntBASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 AL591424.1-201ENST00000442569 1213 ntBASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.97□□□□□ -0.01
ZIC4Q8N9L1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZIC4Q8N9L1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms