Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 AC087163.2-201ENST00000457299 853 ntBASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 AC040169.1-201ENST00000565382 521 ntBASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PCDH20Q8N6Y1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 AC023511.2-201ENST00000618803 211 ntBASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PCDH20Q8N6Y1 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDH20Q8N6Y1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 IGLL3P-201ENST00000412472 434 ntBASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH20Q8N6Y1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH20Q8N6Y1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms