Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 MIR3687-1-201ENST00000614492 61 ntBASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM48Q8IWZ4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 KRT18P2-201ENST00000447938 1258 ntBASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 AC084018.2-201ENST00000613093 2607 ntBASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM48Q8IWZ4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 AC002310.6-201ENST00000624451 1377 ntBASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM48Q8IWZ4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM48Q8IWZ4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms